Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Alx1Q8C8B0 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Alx1Q8C8B0 AC122367.1-201ENSMUST00000221978 1709 ntBASIC12.4□□□□□ -0.43
Alx1Q8C8B0 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Alx1Q8C8B0 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.4□□□□□ -0.43
Alx1Q8C8B0 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx1Q8C8B0 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx1Q8C8B0 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx1Q8C8B0 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx1Q8C8B0 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC12.39□□□□□ -0.43
Alx1Q8C8B0 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx1Q8C8B0 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx1Q8C8B0 Ptgr2-201ENSMUST00000123614 3168 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx1Q8C8B0 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Alx1Q8C8B0 AC124561.1-202ENSMUST00000228652 1929 ntBASIC12.39□□□□□ -0.43
Alx1Q8C8B0 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx1Q8C8B0 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Alx1Q8C8B0 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.39□□□□□ -0.43
Alx1Q8C8B0 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx1Q8C8B0 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Alx1Q8C8B0 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx1Q8C8B0 Zbp1-202ENSMUST00000109116 770 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Alx1Q8C8B0 Klrc2-202ENSMUST00000112057 1149 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx1Q8C8B0 Gm12028-201ENSMUST00000118065 436 ntBASIC12.39□□□□□ -0.43
Alx1Q8C8B0 Selenot-ps-201ENSMUST00000119098 593 ntBASIC12.39□□□□□ -0.43
Alx1Q8C8B0 Aif1l-207ENSMUST00000148056 670 ntTSL 5 BASIC12.39□□□□□ -0.43
Alx1Q8C8B0 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC12.39□□□□□ -0.43
Alx1Q8C8B0 Gm43244-201ENSMUST00000196994 1285 ntBASIC12.39□□□□□ -0.43
Alx1Q8C8B0 Gm8083-201ENSMUST00000203976 475 ntBASIC12.39□□□□□ -0.43
Alx1Q8C8B0 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Alx1Q8C8B0 AC142266.1-201ENSMUST00000228107 415 ntBASIC12.39□□□□□ -0.43
Alx1Q8C8B0 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Alx1Q8C8B0 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx1Q8C8B0 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Alx1Q8C8B0 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Alx1Q8C8B0 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Alx1Q8C8B0 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx1Q8C8B0 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx1Q8C8B0 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx1Q8C8B0 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx1Q8C8B0 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx1Q8C8B0 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx1Q8C8B0 AC154186.1-201ENSMUST00000227711 1597 ntBASIC12.39□□□□□ -0.43
Alx1Q8C8B0 Chrm5-201ENSMUST00000099589 1599 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Alx1Q8C8B0 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Alx1Q8C8B0 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Alx1Q8C8B0 Zfp42-201ENSMUST00000082120 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Alx1Q8C8B0 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Alx1Q8C8B0 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Alx1Q8C8B0 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Alx1Q8C8B0 Acvr1-203ENSMUST00000112599 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Alx1Q8C8B0 Ufsp2-201ENSMUST00000034051 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Alx1Q8C8B0 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Alx1Q8C8B0 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Alx1Q8C8B0 Gm15285-201ENSMUST00000119271 473 ntBASIC12.38□□□□□ -0.43
Alx1Q8C8B0 Gm6500-201ENSMUST00000119412 451 ntBASIC12.38□□□□□ -0.43
Alx1Q8C8B0 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Alx1Q8C8B0 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Alx1Q8C8B0 Gm27956-201ENSMUST00000175604 260 ntBASIC12.38□□□□□ -0.43
Alx1Q8C8B0 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC12.38□□□□□ -0.43
Alx1Q8C8B0 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Alx1Q8C8B0 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC12.38□□□□□ -0.43
Alx1Q8C8B0 Gm8796-201ENSMUST00000219122 936 ntBASIC12.38□□□□□ -0.43
Alx1Q8C8B0 AC174797.2-201ENSMUST00000225835 165 ntBASIC12.38□□□□□ -0.43
Alx1Q8C8B0 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Alx1Q8C8B0 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Alx1Q8C8B0 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Alx1Q8C8B0 Gm44975-201ENSMUST00000207435 1390 ntBASIC12.38□□□□□ -0.43
Alx1Q8C8B0 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Alx1Q8C8B0 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Alx1Q8C8B0 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Alx1Q8C8B0 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Alx1Q8C8B0 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.38□□□□□ -0.43
Alx1Q8C8B0 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Alx1Q8C8B0 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Alx1Q8C8B0 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Alx1Q8C8B0 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.38□□□□□ -0.43
Alx1Q8C8B0 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Alx1Q8C8B0 Nr2c1-201ENSMUST00000092213 2376 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Kif2a-206ENSMUST00000159772 2570 ntTSL 5 BASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC12.37□□□□□ -0.43
Alx1Q8C8B0 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Htr3b-201ENSMUST00000008734 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Gm24470-201ENSMUST00000104486 132 ntBASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Gstm6-204ENSMUST00000106684 1179 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Gm15625-201ENSMUST00000117617 1093 ntBASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Gm14231-201ENSMUST00000120090 592 ntBASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Gm11701-201ENSMUST00000121277 1142 ntBASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms