Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Pzp-201ENSMUST00000112132 4681 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Gm16441-201ENSMUST00000138176 924 ntBASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Gm5526-201ENSMUST00000153604 423 ntBASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Gm6038-201ENSMUST00000154310 948 ntBASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Gm7939-201ENSMUST00000201233 1050 ntBASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 BC080696-201ENSMUST00000202858 1218 ntBASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Gm9520-201ENSMUST00000209460 1253 ntBASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Stxbp5l-206ENSMUST00000114787 4394 ntAPPRIS P3 TSL 5 BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Plekha6-201ENSMUST00000038295 7388 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Fhad1-203ENSMUST00000105780 4809 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Gm15519-201ENSMUST00000120088 1566 ntBASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Pcdh19Q80TF3 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Prss23os-202ENSMUST00000179361 1362 ntBASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Gm37965-201ENSMUST00000195304 1362 ntBASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Gm15625-201ENSMUST00000117617 1093 ntBASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Gm5764-201ENSMUST00000118817 885 ntBASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Gm12943-201ENSMUST00000119616 210 ntBASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Gm11573-201ENSMUST00000119956 394 ntBASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Gm16459-201ENSMUST00000121443 686 ntBASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Gm12906-201ENSMUST00000154610 441 ntBASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Gm24328-201ENSMUST00000175104 67 ntBASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Gm7985-201ENSMUST00000183329 981 ntBASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Gm42803-201ENSMUST00000201051 451 ntBASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 CT030652.1-201ENSMUST00000227377 1235 ntBASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Mir194-2-201ENSMUST00000083648 86 ntBASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC10.55□□□□□ -0.72
Pcdh19Q80TF3 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms