Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Gm29601-201ENSMUST00000187961 1349 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Gpa33-204ENSMUST00000166860 2227 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Gm45416-201ENSMUST00000209713 2201 ntBASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Gm26616-202ENSMUST00000195676 3107 ntBASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Pcdh15-221ENSMUST00000146682 1891 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Gm13527-201ENSMUST00000117926 691 ntBASIC9.79□□□□□ -0.84
Spg11Q3UHA3 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Gm12746-201ENSMUST00000151369 615 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Gm9075-201ENSMUST00000168738 794 ntBASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Mrgpra3-201ENSMUST00000176369 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Gm27483-201ENSMUST00000184983 71 ntBASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Gm42591-201ENSMUST00000197249 700 ntBASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Gm5043-201ENSMUST00000202103 820 ntBASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Hprt-201ENSMUST00000026723 1289 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Snapc5-201ENSMUST00000034965 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 C8b-202ENSMUST00000065072 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Gm37036-201ENSMUST00000192836 2506 ntBASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Esd-201ENSMUST00000022573 1988 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Spg11Q3UHA3 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC9.78□□□□□ -0.84
Spg11Q3UHA3 Sidt2-202ENSMUST00000114573 4012 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Spg11Q3UHA3 Gm6285-201ENSMUST00000122012 498 ntBASIC9.78□□□□□ -0.84
Spg11Q3UHA3 Gm14487-201ENSMUST00000145413 1259 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Spg11Q3UHA3 1810018F18Rik-201ENSMUST00000188253 277 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Spg11Q3UHA3 Gm28922-201ENSMUST00000189785 308 ntBASIC9.78□□□□□ -0.84
Spg11Q3UHA3 Gm38153-201ENSMUST00000195484 472 ntBASIC9.78□□□□□ -0.84
Spg11Q3UHA3 Gm15860-203ENSMUST00000197262 360 ntTSL 3 BASIC9.78□□□□□ -0.84
Spg11Q3UHA3 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC9.78□□□□□ -0.84
Spg11Q3UHA3 AC107851.1-201ENSMUST00000215982 417 ntTSL 2 BASIC9.78□□□□□ -0.84
Spg11Q3UHA3 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Spg11Q3UHA3 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC9.78□□□□□ -0.84
Spg11Q3UHA3 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Spg11Q3UHA3 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Spg11Q3UHA3 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Spg11Q3UHA3 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Spg11Q3UHA3 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Spg11Q3UHA3 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Spg11Q3UHA3 Nr1h4-202ENSMUST00000105296 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Spg11Q3UHA3 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Spg11Q3UHA3 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Spg11Q3UHA3 A830018L16Rik-203ENSMUST00000137824 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Spg11Q3UHA3 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Spg11Q3UHA3 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC9.78□□□□□ -0.84
Spg11Q3UHA3 Gm43860-201ENSMUST00000201742 2705 ntBASIC9.78□□□□□ -0.84
Spg11Q3UHA3 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Spg11Q3UHA3 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Spg11Q3UHA3 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC9.78□□□□□ -0.84
Spg11Q3UHA3 Gm3532-201ENSMUST00000181880 1396 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Spg11Q3UHA3 9630002D21Rik-201ENSMUST00000221128 1351 ntTSL 5 BASIC9.78□□□□□ -0.84
Spg11Q3UHA3 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Spg11Q3UHA3 Btrc-209ENSMUST00000224478 2194 ntBASIC9.78□□□□□ -0.84
Spg11Q3UHA3 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Spg11Q3UHA3 n-R5s90-201ENSMUST00000103968 118 ntBASIC9.78□□□□□ -0.84
Spg11Q3UHA3 Gm12376-201ENSMUST00000120538 607 ntBASIC9.78□□□□□ -0.84
Spg11Q3UHA3 Gm13551-201ENSMUST00000121286 430 ntBASIC9.78□□□□□ -0.84
Spg11Q3UHA3 Gm16574-201ENSMUST00000159301 745 ntBASIC9.78□□□□□ -0.84
Spg11Q3UHA3 Mipep-ps-201ENSMUST00000177439 291 ntBASIC9.78□□□□□ -0.84
Spg11Q3UHA3 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC9.78□□□□□ -0.84
Spg11Q3UHA3 Gm44139-201ENSMUST00000204903 373 ntBASIC9.78□□□□□ -0.84
Spg11Q3UHA3 Gm35665-201ENSMUST00000206742 1140 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Spg11Q3UHA3 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC9.78□□□□□ -0.84
Spg11Q3UHA3 AC134439.3-201ENSMUST00000223486 851 ntTSL 5 BASIC9.78□□□□□ -0.84
Spg11Q3UHA3 Gm26397-201ENSMUST00000083703 134 ntBASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms