Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm3372-201ENSMUST00000198806 1792 ntBASIC9.63□□□□□ -0.87
SgcbP82349 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SgcbP82349 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SgcbP82349 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SgcbP82349 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SgcbP82349 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SgcbP82349 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SgcbP82349 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SgcbP82349 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SgcbP82349 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SgcbP82349 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SgcbP82349 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC9.62□□□□□ -0.87
SgcbP82349 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC9.62□□□□□ -0.87
SgcbP82349 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SgcbP82349 Gm26474-201ENSMUST00000116762 122 ntBASIC9.62□□□□□ -0.87
SgcbP82349 Gm14993-201ENSMUST00000121180 164 ntBASIC9.62□□□□□ -0.87
SgcbP82349 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC9.62□□□□□ -0.87
SgcbP82349 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC9.62□□□□□ -0.87
SgcbP82349 Gm20392-201ENSMUST00000173047 701 ntBASIC9.62□□□□□ -0.87
SgcbP82349 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
SgcbP82349 Gm6771-201ENSMUST00000182716 1001 ntBASIC9.62□□□□□ -0.87
SgcbP82349 Gm7985-201ENSMUST00000183329 981 ntBASIC9.62□□□□□ -0.87
SgcbP82349 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SgcbP82349 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC9.62□□□□□ -0.87
SgcbP82349 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC9.62□□□□□ -0.87
SgcbP82349 Gm44237-201ENSMUST00000205183 936 ntBASIC9.62□□□□□ -0.87
SgcbP82349 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
SgcbP82349 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC9.62□□□□□ -0.87
SgcbP82349 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC9.62□□□□□ -0.87
SgcbP82349 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
SgcbP82349 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC9.62□□□□□ -0.87
SgcbP82349 AC164429.1-201ENSMUST00000224210 518 ntBASIC9.62□□□□□ -0.87
SgcbP82349 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SgcbP82349 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SgcbP82349 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SgcbP82349 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
SgcbP82349 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SgcbP82349 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
SgcbP82349 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SgcbP82349 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
SgcbP82349 Als2-201ENSMUST00000027178 6342 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SgcbP82349 Scml4-201ENSMUST00000063063 4885 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SgcbP82349 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SgcbP82349 Gm43435-201ENSMUST00000199996 1438 ntBASIC9.62□□□□□ -0.87
SgcbP82349 Gm26848-201ENSMUST00000181052 2467 ntTSL 5 BASIC9.62□□□□□ -0.87
SgcbP82349 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC9.62□□□□□ -0.87
SgcbP82349 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SgcbP82349 Gm45210-201ENSMUST00000206401 1577 ntBASIC9.62□□□□□ -0.87
SgcbP82349 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC9.62□□□□□ -0.87
SgcbP82349 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SgcbP82349 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SgcbP82349 Gm38312-201ENSMUST00000195426 1746 ntBASIC9.62□□□□□ -0.87
SgcbP82349 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SgcbP82349 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SgcbP82349 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SgcbP82349 Gm6768-201ENSMUST00000022467 1878 ntBASIC9.62□□□□□ -0.87
SgcbP82349 Cxcl12-201ENSMUST00000073043 5627 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SgcbP82349 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SgcbP82349 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SgcbP82349 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SgcbP82349 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SgcbP82349 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
SgcbP82349 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SgcbP82349 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SgcbP82349 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
SgcbP82349 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC9.61□□□□□ -0.87
SgcbP82349 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SgcbP82349 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SgcbP82349 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SgcbP82349 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SgcbP82349 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
SgcbP82349 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
SgcbP82349 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC9.61□□□□□ -0.87
SgcbP82349 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC9.61□□□□□ -0.87
SgcbP82349 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC9.61□□□□□ -0.87
SgcbP82349 Gm14234-201ENSMUST00000119539 845 ntBASIC9.61□□□□□ -0.87
SgcbP82349 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC9.61□□□□□ -0.87
SgcbP82349 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SgcbP82349 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC9.61□□□□□ -0.87
SgcbP82349 Gm24809-201ENSMUST00000175318 271 ntBASIC9.61□□□□□ -0.87
SgcbP82349 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC9.61□□□□□ -0.87
SgcbP82349 Gm44845-201ENSMUST00000208773 335 ntBASIC9.61□□□□□ -0.87
SgcbP82349 Gm44582-201ENSMUST00000209125 445 ntBASIC9.61□□□□□ -0.87
SgcbP82349 Gm18466-201ENSMUST00000209147 499 ntBASIC9.61□□□□□ -0.87
SgcbP82349 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC9.61□□□□□ -0.87
SgcbP82349 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC9.61□□□□□ -0.87
SgcbP82349 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SgcbP82349 Gm9487-201ENSMUST00000216600 472 ntBASIC9.61□□□□□ -0.87
SgcbP82349 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC9.61□□□□□ -0.87
SgcbP82349 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
SgcbP82349 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC9.61□□□□□ -0.87
SgcbP82349 Gm4604-201ENSMUST00000025040 390 ntBASIC9.61□□□□□ -0.87
SgcbP82349 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SgcbP82349 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SgcbP82349 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
SgcbP82349 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
SgcbP82349 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
SgcbP82349 Disp2-201ENSMUST00000037547 6626 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SgcbP82349 Plxdc2-201ENSMUST00000028081 6947 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SgcbP82349 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms