Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ybx1P62960 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ybx1P62960 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC10.95□□□□□ -0.66
Ybx1P62960 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
Ybx1P62960 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.95□□□□□ -0.66
Ybx1P62960 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ybx1P62960 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ybx1P62960 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ybx1P62960 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ybx1P62960 Gm23132-201ENSMUST00000104254 132 ntBASIC10.95□□□□□ -0.66
Ybx1P62960 Gm13426-201ENSMUST00000117887 795 ntBASIC10.95□□□□□ -0.66
Ybx1P62960 Gm11473-201ENSMUST00000118980 359 ntBASIC10.95□□□□□ -0.66
Ybx1P62960 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ybx1P62960 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC10.95□□□□□ -0.66
Ybx1P62960 Gm6425-201ENSMUST00000136332 790 ntBASIC10.95□□□□□ -0.66
Ybx1P62960 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ybx1P62960 Gm17944-201ENSMUST00000186351 643 ntBASIC10.95□□□□□ -0.66
Ybx1P62960 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ybx1P62960 Gm8525-201ENSMUST00000189674 861 ntBASIC10.95□□□□□ -0.66
Ybx1P62960 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ybx1P62960 Gm8226-201ENSMUST00000190511 798 ntBASIC10.95□□□□□ -0.66
Ybx1P62960 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC10.95□□□□□ -0.66
Ybx1P62960 Gm5738-201ENSMUST00000206016 779 ntBASIC10.95□□□□□ -0.66
Ybx1P62960 Gm5040-201ENSMUST00000218609 800 ntBASIC10.95□□□□□ -0.66
Ybx1P62960 Gm8796-201ENSMUST00000219122 936 ntBASIC10.95□□□□□ -0.66
Ybx1P62960 Gm7242-201ENSMUST00000221134 705 ntBASIC10.95□□□□□ -0.66
Ybx1P62960 AC154461.1-201ENSMUST00000224207 1005 ntBASIC10.95□□□□□ -0.66
Ybx1P62960 AC154477.1-201ENSMUST00000226515 773 ntBASIC10.95□□□□□ -0.66
Ybx1P62960 AC137842.2-201ENSMUST00000227734 797 ntBASIC10.95□□□□□ -0.66
Ybx1P62960 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ybx1P62960 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC10.95□□□□□ -0.66
Ybx1P62960 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ybx1P62960 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ybx1P62960 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Ybx1P62960 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Ybx1P62960 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.95□□□□□ -0.66
Ybx1P62960 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.95□□□□□ -0.66
Ybx1P62960 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ybx1P62960 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ybx1P62960 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ybx1P62960 Gm10537-201ENSMUST00000192625 1698 ntBASIC10.95□□□□□ -0.66
Ybx1P62960 Gm45719-201ENSMUST00000207954 1662 ntBASIC10.95□□□□□ -0.66
Ybx1P62960 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ybx1P62960 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.95□□□□□ -0.66
Ybx1P62960 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Ybx1P62960 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Ybx1P62960 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ybx1P62960 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ybx1P62960 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Ybx1P62960 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ybx1P62960 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
Ybx1P62960 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC10.94□□□□□ -0.66
Ybx1P62960 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC10.94□□□□□ -0.66
Ybx1P62960 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.94□□□□□ -0.66
Ybx1P62960 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Ybx1P62960 Gm13608-201ENSMUST00000121807 1406 ntBASIC10.94□□□□□ -0.66
Ybx1P62960 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Ybx1P62960 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Ybx1P62960 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ybx1P62960 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ybx1P62960 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ybx1P62960 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ybx1P62960 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.94□□□□□ -0.66
Ybx1P62960 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Ybx1P62960 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ybx1P62960 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ybx1P62960 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ybx1P62960 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ybx1P62960 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ybx1P62960 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC10.94□□□□□ -0.66
Ybx1P62960 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ybx1P62960 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ybx1P62960 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ybx1P62960 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC10.94□□□□□ -0.66
Ybx1P62960 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ybx1P62960 Gm38038-201ENSMUST00000193803 259 ntBASIC10.94□□□□□ -0.66
Ybx1P62960 Gm38233-201ENSMUST00000194259 807 ntBASIC10.94□□□□□ -0.66
Ybx1P62960 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC10.94□□□□□ -0.66
Ybx1P62960 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC10.94□□□□□ -0.66
Ybx1P62960 AC133496.1-201ENSMUST00000223891 743 ntBASIC10.94□□□□□ -0.66
Ybx1P62960 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Ybx1P62960 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ybx1P62960 AC124732.3-201ENSMUST00000221835 1765 ntBASIC10.94□□□□□ -0.66
Ybx1P62960 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ybx1P62960 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Ybx1P62960 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ybx1P62960 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Ybx1P62960 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ybx1P62960 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ybx1P62960 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ybx1P62960 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Ybx1P62960 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ybx1P62960 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Ybx1P62960 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ybx1P62960 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ybx1P62960 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ybx1P62960 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ybx1P62960 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ybx1P62960 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.94□□□□□ -0.66
Ybx1P62960 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms