Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Lsm6P62313 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lsm6P62313 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lsm6P62313 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lsm6P62313 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lsm6P62313 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lsm6P62313 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lsm6P62313 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC9.37□□□□□ -0.91
Lsm6P62313 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lsm6P62313 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC9.37□□□□□ -0.91
Lsm6P62313 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lsm6P62313 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC9.37□□□□□ -0.91
Lsm6P62313 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lsm6P62313 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm6P62313 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm6P62313 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm6P62313 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm6P62313 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC9.36□□□□□ -0.91
Lsm6P62313 Gm37242-201ENSMUST00000191873 2085 ntBASIC9.36□□□□□ -0.91
Lsm6P62313 Gm42971-201ENSMUST00000199228 2079 ntBASIC9.36□□□□□ -0.91
Lsm6P62313 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm6P62313 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Lsm6P62313 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm6P62313 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Lsm6P62313 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Lsm6P62313 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm6P62313 AC144938.1-201ENSMUST00000223994 2167 ntBASIC9.36□□□□□ -0.91
Lsm6P62313 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm6P62313 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm6P62313 Adcy6-205ENSMUST00000228566 3707 ntAPPRIS ALT1 BASIC9.36□□□□□ -0.91
Lsm6P62313 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC9.36□□□□□ -0.91
Lsm6P62313 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm6P62313 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Lsm6P62313 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Lsm6P62313 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm6P62313 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm6P62313 Gm14807-201ENSMUST00000116640 983 ntBASIC9.36□□□□□ -0.91
Lsm6P62313 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC9.36□□□□□ -0.91
Lsm6P62313 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC9.36□□□□□ -0.91
Lsm6P62313 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm6P62313 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC9.36□□□□□ -0.91
Lsm6P62313 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm6P62313 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm6P62313 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC9.36□□□□□ -0.91
Lsm6P62313 Mir3102-201ENSMUST00000175555 104 ntBASIC9.36□□□□□ -0.91
Lsm6P62313 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Lsm6P62313 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm6P62313 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm6P62313 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC9.36□□□□□ -0.91
Lsm6P62313 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm6P62313 Gm28833-201ENSMUST00000189671 559 ntBASIC9.36□□□□□ -0.91
Lsm6P62313 Gm8365-201ENSMUST00000197334 648 ntBASIC9.36□□□□□ -0.91
Lsm6P62313 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
Lsm6P62313 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC9.36□□□□□ -0.91
Lsm6P62313 Gm7319-201ENSMUST00000210047 778 ntBASIC9.36□□□□□ -0.91
Lsm6P62313 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC9.36□□□□□ -0.91
Lsm6P62313 AC122876.1-201ENSMUST00000217619 825 ntBASIC9.36□□□□□ -0.91
Lsm6P62313 Gm8170-201ENSMUST00000218581 945 ntBASIC9.36□□□□□ -0.91
Lsm6P62313 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC9.36□□□□□ -0.91
Lsm6P62313 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC9.36□□□□□ -0.91
Lsm6P62313 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC9.36□□□□□ -0.91
Lsm6P62313 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm6P62313 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm6P62313 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm6P62313 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm6P62313 Gm44056-201ENSMUST00000204623 1427 ntBASIC9.36□□□□□ -0.91
Lsm6P62313 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC9.36□□□□□ -0.91
Lsm6P62313 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm6P62313 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm6P62313 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Lsm6P62313 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm6P62313 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm6P62313 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm6P62313 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm6P62313 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC9.36□□□□□ -0.91
Lsm6P62313 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm6P62313 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Lsm6P62313 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm6P62313 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm6P62313 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Lsm6P62313 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Lsm6P62313 AC140462.2-201ENSMUST00000225718 2433 ntBASIC9.35□□□□□ -0.91
Lsm6P62313 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm6P62313 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm6P62313 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm6P62313 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Lsm6P62313 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm6P62313 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm6P62313 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm6P62313 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm6P62313 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm6P62313 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Lsm6P62313 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm6P62313 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm6P62313 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm6P62313 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm6P62313 Gm6158-201ENSMUST00000109467 904 ntBASIC9.35□□□□□ -0.91
Lsm6P62313 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Lsm6P62313 Gm8036-201ENSMUST00000118089 1718 ntBASIC9.35□□□□□ -0.91
Lsm6P62313 Gm13937-201ENSMUST00000121000 988 ntBASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms