Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup43P59235 Gm15968-201ENSMUST00000119342 1168 ntBASIC10.1□□□□□ -0.79
Nup43P59235 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC10.1□□□□□ -0.79
Nup43P59235 Gm12628-201ENSMUST00000122193 382 ntBASIC10.1□□□□□ -0.79
Nup43P59235 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC10.1□□□□□ -0.79
Nup43P59235 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nup43P59235 Csnk1a1-208ENSMUST00000167187 1222 ntTSL 5 BASIC10.1□□□□□ -0.79
Nup43P59235 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC10.1□□□□□ -0.79
Nup43P59235 Gm40332-201ENSMUST00000199847 938 ntBASIC10.1□□□□□ -0.79
Nup43P59235 Gm43912-201ENSMUST00000204352 538 ntBASIC10.1□□□□□ -0.79
Nup43P59235 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC10.1□□□□□ -0.79
Nup43P59235 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC10.1□□□□□ -0.79
Nup43P59235 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.1□□□□□ -0.79
Nup43P59235 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup43P59235 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup43P59235 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup43P59235 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Nup43P59235 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup43P59235 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup43P59235 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup43P59235 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Nup43P59235 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Nup43P59235 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Nup43P59235 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC10.1□□□□□ -0.79
Nup43P59235 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Nup43P59235 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC10.1□□□□□ -0.79
Nup43P59235 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Nup43P59235 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup43P59235 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup43P59235 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup43P59235 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup43P59235 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC10.09□□□□□ -0.79
Nup43P59235 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup43P59235 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC10.09□□□□□ -0.79
Nup43P59235 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Nup43P59235 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup43P59235 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup43P59235 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nup43P59235 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Nup43P59235 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nup43P59235 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.09□□□□□ -0.79
Nup43P59235 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Nup43P59235 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nup43P59235 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup43P59235 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup43P59235 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nup43P59235 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.09□□□□□ -0.79
Nup43P59235 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.09□□□□□ -0.79
Nup43P59235 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC10.09□□□□□ -0.79
Nup43P59235 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC10.09□□□□□ -0.79
Nup43P59235 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Nup43P59235 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nup43P59235 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nup43P59235 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC10.09□□□□□ -0.79
Nup43P59235 Gm12337-201ENSMUST00000119634 400 ntBASIC10.09□□□□□ -0.79
Nup43P59235 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup43P59235 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC10.09□□□□□ -0.79
Nup43P59235 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Nup43P59235 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC10.09□□□□□ -0.79
Nup43P59235 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup43P59235 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nup43P59235 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC10.09□□□□□ -0.79
Nup43P59235 Gm22876-201ENSMUST00000175450 298 ntBASIC10.09□□□□□ -0.79
Nup43P59235 Gm22877-201ENSMUST00000175451 105 ntBASIC10.09□□□□□ -0.79
Nup43P59235 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nup43P59235 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup43P59235 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nup43P59235 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Nup43P59235 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC10.09□□□□□ -0.79
Nup43P59235 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nup43P59235 AC134601.2-201ENSMUST00000221071 130 ntBASIC10.09□□□□□ -0.79
Nup43P59235 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Nup43P59235 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Nup43P59235 AC154431.1-201ENSMUST00000224910 880 ntBASIC10.09□□□□□ -0.79
Nup43P59235 Mir194-2-201ENSMUST00000083648 86 ntBASIC10.09□□□□□ -0.79
Nup43P59235 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Nup43P59235 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup43P59235 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup43P59235 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup43P59235 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.09□□□□□ -0.79
Nup43P59235 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup43P59235 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup43P59235 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Nup43P59235 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup43P59235 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup43P59235 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup43P59235 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup43P59235 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup43P59235 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup43P59235 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup43P59235 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC10.09□□□□□ -0.79
Nup43P59235 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nup43P59235 Gm45124-201ENSMUST00000206723 2755 ntBASIC10.09□□□□□ -0.79
Nup43P59235 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nup43P59235 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nup43P59235 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nup43P59235 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nup43P59235 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nup43P59235 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC10.08□□□□□ -0.8
Nup43P59235 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 98.1 ms