Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm3922-201ENSMUST00000200519 435 ntBASIC10.97□□□□□ -0.65
Sox1P53783 Olfr371-202ENSMUST00000218663 1162 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Sox1P53783 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Sox1P53783 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox1P53783 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sox1P53783 Zscan5b-203ENSMUST00000165445 1407 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Sox1P53783 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox1P53783 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Sox1P53783 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Sox1P53783 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox1P53783 Gm26953-209ENSMUST00000213051 2087 ntTSL 5 BASIC10.97□□□□□ -0.65
Sox1P53783 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.97□□□□□ -0.65
Sox1P53783 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox1P53783 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.97□□□□□ -0.65
Sox1P53783 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox1P53783 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Sox1P53783 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox1P53783 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Sox1P53783 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox1P53783 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox1P53783 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox1P53783 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sox1P53783 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox1P53783 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox1P53783 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox1P53783 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox1P53783 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.96□□□□□ -0.65
Sox1P53783 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sox1P53783 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.96□□□□□ -0.65
Sox1P53783 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Sox1P53783 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox1P53783 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Sox1P53783 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Sox1P53783 2310016D03Rik-201ENSMUST00000190206 1547 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sox1P53783 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox1P53783 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.96□□□□□ -0.65
Sox1P53783 Fkbp6-201ENSMUST00000044972 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox1P53783 Gm5046-201ENSMUST00000100608 611 ntBASIC10.96□□□□□ -0.65
Sox1P53783 Gm14853-201ENSMUST00000116081 549 ntBASIC10.96□□□□□ -0.65
Sox1P53783 Gm16058-201ENSMUST00000124392 427 ntTSL 2 BASIC10.96□□□□□ -0.65
Sox1P53783 Maats1os-201ENSMUST00000133496 326 ntTSL 3 BASIC10.96□□□□□ -0.65
Sox1P53783 Gm23757-201ENSMUST00000158353 100 ntBASIC10.96□□□□□ -0.65
Sox1P53783 Gm26241-201ENSMUST00000174944 101 ntBASIC10.96□□□□□ -0.65
Sox1P53783 Gm23976-201ENSMUST00000175001 101 ntBASIC10.96□□□□□ -0.65
Sox1P53783 Gm22463-201ENSMUST00000175274 101 ntBASIC10.96□□□□□ -0.65
Sox1P53783 Gm22547-201ENSMUST00000175281 101 ntBASIC10.96□□□□□ -0.65
Sox1P53783 Gm22913-201ENSMUST00000175297 101 ntBASIC10.96□□□□□ -0.65
Sox1P53783 Gm23282-201ENSMUST00000175306 101 ntBASIC10.96□□□□□ -0.65
Sox1P53783 Gm25972-201ENSMUST00000175374 101 ntBASIC10.96□□□□□ -0.65
Sox1P53783 Gm22414-201ENSMUST00000175466 101 ntBASIC10.96□□□□□ -0.65
Sox1P53783 Gm26235-201ENSMUST00000175533 101 ntBASIC10.96□□□□□ -0.65
Sox1P53783 Gm25084-201ENSMUST00000175556 101 ntBASIC10.96□□□□□ -0.65
Sox1P53783 Gm24973-201ENSMUST00000175588 101 ntBASIC10.96□□□□□ -0.65
Sox1P53783 Gm23292-201ENSMUST00000175618 101 ntBASIC10.96□□□□□ -0.65
Sox1P53783 Vmn2r-ps7-201ENSMUST00000176244 1098 ntBASIC10.96□□□□□ -0.65
Sox1P53783 Gm23646-201ENSMUST00000178119 101 ntBASIC10.96□□□□□ -0.65
Sox1P53783 Gm24643-201ENSMUST00000178305 101 ntBASIC10.96□□□□□ -0.65
Sox1P53783 Gm24302-201ENSMUST00000178350 101 ntBASIC10.96□□□□□ -0.65
Sox1P53783 Gm26386-201ENSMUST00000178407 101 ntBASIC10.96□□□□□ -0.65
Sox1P53783 Gm25458-201ENSMUST00000178981 101 ntBASIC10.96□□□□□ -0.65
Sox1P53783 Ap1g1-206ENSMUST00000179104 1096 ntBASIC10.96□□□□□ -0.65
Sox1P53783 Gm22825-201ENSMUST00000179444 101 ntBASIC10.96□□□□□ -0.65
Sox1P53783 Gm29266-201ENSMUST00000190392 600 ntTSL 3 BASIC10.96□□□□□ -0.65
Sox1P53783 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sox1P53783 Gm42867-201ENSMUST00000202995 469 ntBASIC10.96□□□□□ -0.65
Sox1P53783 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC10.96□□□□□ -0.65
Sox1P53783 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.96□□□□□ -0.65
Sox1P53783 Cdca8-201ENSMUST00000030690 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sox1P53783 Spaca5-201ENSMUST00000040437 640 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Sox1P53783 1110017D15Rik-202ENSMUST00000095126 884 ntTSL 3 BASIC10.96□□□□□ -0.65
Sox1P53783 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sox1P53783 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sox1P53783 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sox1P53783 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Sox1P53783 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Sox1P53783 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.96□□□□□ -0.66
Sox1P53783 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Sox1P53783 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sox1P53783 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.96□□□□□ -0.66
Sox1P53783 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Sox1P53783 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox1P53783 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sox1P53783 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox1P53783 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox1P53783 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox1P53783 Vps45-201ENSMUST00000015891 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox1P53783 Gm8684-201ENSMUST00000195078 1564 ntBASIC10.95□□□□□ -0.66
Sox1P53783 Gm18719-201ENSMUST00000196696 1413 ntBASIC10.95□□□□□ -0.66
Sox1P53783 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox1P53783 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox1P53783 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Sox1P53783 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox1P53783 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox1P53783 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox1P53783 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sox1P53783 Gm11235-201ENSMUST00000117763 333 ntBASIC10.95□□□□□ -0.66
Sox1P53783 Pex13-ps-201ENSMUST00000118184 1157 ntBASIC10.95□□□□□ -0.66
Sox1P53783 Gm22481-201ENSMUST00000122562 192 ntBASIC10.95□□□□□ -0.66
Sox1P53783 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC10.95□□□□□ -0.66
Sox1P53783 D430040D24Rik-201ENSMUST00000149224 910 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms