Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rfx3P48381 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rfx3P48381 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rfx3P48381 Lrat-201ENSMUST00000029632 5351 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rfx3P48381 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rfx3P48381 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
Rfx3P48381 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rfx3P48381 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rfx3P48381 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC9.61□□□□□ -0.87
Rfx3P48381 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Rfx3P48381 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rfx3P48381 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rfx3P48381 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rfx3P48381 Exoc4-202ENSMUST00000090381 2598 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rfx3P48381 Gm25766-201ENSMUST00000104101 131 ntBASIC9.61□□□□□ -0.87
Rfx3P48381 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC9.61□□□□□ -0.87
Rfx3P48381 Gm14892-201ENSMUST00000117636 267 ntBASIC9.61□□□□□ -0.87
Rfx3P48381 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rfx3P48381 Gm12029-201ENSMUST00000120073 832 ntBASIC9.61□□□□□ -0.87
Rfx3P48381 Gm12136-201ENSMUST00000120460 1209 ntBASIC9.61□□□□□ -0.87
Rfx3P48381 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC9.61□□□□□ -0.87
Rfx3P48381 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rfx3P48381 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Rfx3P48381 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Rfx3P48381 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC9.61□□□□□ -0.87
Rfx3P48381 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rfx3P48381 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rfx3P48381 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC9.61□□□□□ -0.87
Rfx3P48381 Id2-203ENSMUST00000222667 958 ntBASIC9.61□□□□□ -0.87
Rfx3P48381 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rfx3P48381 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rfx3P48381 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rfx3P48381 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rfx3P48381 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rfx3P48381 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rfx3P48381 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Rfx3P48381 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rfx3P48381 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rfx3P48381 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC9.61□□□□□ -0.87
Rfx3P48381 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rfx3P48381 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rfx3P48381 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rfx3P48381 Speer4b-201ENSMUST00000053257 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rfx3P48381 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rfx3P48381 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Rfx3P48381 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rfx3P48381 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC9.61□□□□□ -0.87
Rfx3P48381 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Rfx3P48381 AC090962.2-201ENSMUST00000225064 1801 ntBASIC9.61□□□□□ -0.87
Rfx3P48381 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rfx3P48381 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rfx3P48381 Ctsa-202ENSMUST00000103092 3646 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Rfx3P48381 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rfx3P48381 Gm45675-201ENSMUST00000211202 3429 ntBASIC9.6□□□□□ -0.87
Rfx3P48381 AC117648.1-201ENSMUST00000219777 2510 ntBASIC9.6□□□□□ -0.87
Rfx3P48381 B4galt4-204ENSMUST00000114711 1481 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rfx3P48381 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC9.6□□□□□ -0.87
Rfx3P48381 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rfx3P48381 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rfx3P48381 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rfx3P48381 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC9.6□□□□□ -0.87
Rfx3P48381 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rfx3P48381 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rfx3P48381 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rfx3P48381 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rfx3P48381 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rfx3P48381 Gm42851-201ENSMUST00000201325 1411 ntBASIC9.6□□□□□ -0.87
Rfx3P48381 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rfx3P48381 St3gal6-207ENSMUST00000137035 4123 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rfx3P48381 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rfx3P48381 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rfx3P48381 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Rfx3P48381 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC9.6□□□□□ -0.87
Rfx3P48381 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
Rfx3P48381 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rfx3P48381 Gm14460-201ENSMUST00000121511 639 ntBASIC9.6□□□□□ -0.87
Rfx3P48381 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC9.6□□□□□ -0.87
Rfx3P48381 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC9.6□□□□□ -0.87
Rfx3P48381 Gm25343-201ENSMUST00000157460 107 ntBASIC9.6□□□□□ -0.87
Rfx3P48381 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rfx3P48381 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rfx3P48381 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC9.6□□□□□ -0.87
Rfx3P48381 Gm6407-201ENSMUST00000176468 549 ntBASIC9.6□□□□□ -0.87
Rfx3P48381 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC9.6□□□□□ -0.87
Rfx3P48381 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rfx3P48381 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC9.6□□□□□ -0.87
Rfx3P48381 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC9.6□□□□□ -0.87
Rfx3P48381 Gm5542-201ENSMUST00000195485 1089 ntBASIC9.6□□□□□ -0.87
Rfx3P48381 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC9.6□□□□□ -0.87
Rfx3P48381 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rfx3P48381 Gm43520-201ENSMUST00000197996 164 ntBASIC9.6□□□□□ -0.87
Rfx3P48381 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC9.6□□□□□ -0.87
Rfx3P48381 Gm45219-201ENSMUST00000205602 465 ntBASIC9.6□□□□□ -0.87
Rfx3P48381 Gm18561-201ENSMUST00000206027 804 ntBASIC9.6□□□□□ -0.87
Rfx3P48381 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC9.6□□□□□ -0.87
Rfx3P48381 Gm44551-201ENSMUST00000208804 171 ntBASIC9.6□□□□□ -0.87
Rfx3P48381 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC9.6□□□□□ -0.87
Rfx3P48381 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rfx3P48381 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC9.6□□□□□ -0.87
Rfx3P48381 Lgi3-203ENSMUST00000226548 1001 ntBASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms