Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp6P0C0A3 Gm25053-201ENSMUST00000103982 133 ntBASIC11.62□□□□□ -0.55
Chmp6P0C0A3 Gm25922-201ENSMUST00000104281 130 ntBASIC11.62□□□□□ -0.55
Chmp6P0C0A3 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp6P0C0A3 Gm13445-201ENSMUST00000121664 307 ntBASIC11.62□□□□□ -0.55
Chmp6P0C0A3 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp6P0C0A3 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC11.62□□□□□ -0.55
Chmp6P0C0A3 Gm24679-201ENSMUST00000158762 111 ntBASIC11.62□□□□□ -0.55
Chmp6P0C0A3 Gm26119-201ENSMUST00000175601 104 ntBASIC11.62□□□□□ -0.55
Chmp6P0C0A3 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Chmp6P0C0A3 Mir7035-201ENSMUST00000184713 82 ntBASIC11.62□□□□□ -0.55
Chmp6P0C0A3 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp6P0C0A3 Gm25053-202ENSMUST00000199731 132 ntBASIC11.62□□□□□ -0.55
Chmp6P0C0A3 Gm6423-201ENSMUST00000204315 934 ntBASIC11.62□□□□□ -0.55
Chmp6P0C0A3 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC11.62□□□□□ -0.55
Chmp6P0C0A3 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp6P0C0A3 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp6P0C0A3 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Chmp6P0C0A3 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp6P0C0A3 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp6P0C0A3 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp6P0C0A3 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp6P0C0A3 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Chmp6P0C0A3 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp6P0C0A3 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp6P0C0A3 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp6P0C0A3 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Chmp6P0C0A3 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp6P0C0A3 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Chmp6P0C0A3 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp6P0C0A3 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp6P0C0A3 Gtf2i-223ENSMUST00000174513 4021 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Chmp6P0C0A3 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp6P0C0A3 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp6P0C0A3 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp6P0C0A3 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Chmp6P0C0A3 Gm25562-201ENSMUST00000104608 133 ntBASIC11.61□□□□□ -0.55
Chmp6P0C0A3 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC11.61□□□□□ -0.55
Chmp6P0C0A3 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp6P0C0A3 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC11.61□□□□□ -0.55
Chmp6P0C0A3 Mir6958-201ENSMUST00000184207 73 ntBASIC11.61□□□□□ -0.55
Chmp6P0C0A3 Gm7255-201ENSMUST00000187371 908 ntBASIC11.61□□□□□ -0.55
Chmp6P0C0A3 Gm37597-201ENSMUST00000191853 382 ntBASIC11.61□□□□□ -0.55
Chmp6P0C0A3 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp6P0C0A3 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC11.61□□□□□ -0.55
Chmp6P0C0A3 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC11.61□□□□□ -0.55
Chmp6P0C0A3 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp6P0C0A3 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC11.61□□□□□ -0.55
Chmp6P0C0A3 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Chmp6P0C0A3 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Chmp6P0C0A3 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Chmp6P0C0A3 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Chmp6P0C0A3 Phtf1os-201ENSMUST00000160110 4046 ntBASIC11.61□□□□□ -0.55
Chmp6P0C0A3 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp6P0C0A3 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp6P0C0A3 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp6P0C0A3 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC11.61□□□□□ -0.55
Chmp6P0C0A3 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp6P0C0A3 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp6P0C0A3 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp6P0C0A3 Smok4a-201ENSMUST00000074512 1455 ntBASIC11.61□□□□□ -0.55
Chmp6P0C0A3 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp6P0C0A3 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp6P0C0A3 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp6P0C0A3 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chmp6P0C0A3 Gm7405-201ENSMUST00000121476 1337 ntBASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Gm45165-201ENSMUST00000207763 1631 ntBASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC11.6□□□□□ -0.55
Chmp6P0C0A3 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp6P0C0A3 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Gm6768-201ENSMUST00000022467 1878 ntBASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Erc1-203ENSMUST00000183703 8760 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Gm11560-201ENSMUST00000117567 948 ntBASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Gm14165-201ENSMUST00000121456 952 ntBASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Gm26982-201ENSMUST00000182250 1151 ntBASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Gm43830-201ENSMUST00000198760 1067 ntBASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Chmp6P0C0A3 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Chmp6P0C0A3 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms