Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Hoxd3P09027 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Hoxd3P09027 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hoxd3P09027 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Hoxd3P09027 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hoxd3P09027 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hoxd3P09027 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Hoxd3P09027 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC8.69□□□□□ -1.02
Hoxd3P09027 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC8.69□□□□□ -1.02
Hoxd3P09027 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Hoxd3P09027 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 Gm17230-201ENSMUST00000171194 3942 ntBASIC8.69□□□□□ -1.02
Hoxd3P09027 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Hoxd3P09027 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Hoxd3P09027 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Hoxd3P09027 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Hoxd3P09027 Gm11628-201ENSMUST00000117568 171 ntBASIC8.69□□□□□ -1.02
Hoxd3P09027 Gm11393-201ENSMUST00000118019 288 ntBASIC8.69□□□□□ -1.02
Hoxd3P09027 Gm13668-201ENSMUST00000119237 1001 ntBASIC8.69□□□□□ -1.02
Hoxd3P09027 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC8.69□□□□□ -1.02
Hoxd3P09027 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC8.69□□□□□ -1.02
Hoxd3P09027 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Hoxd3P09027 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC8.69□□□□□ -1.02
Hoxd3P09027 4933436E23Rik-201ENSMUST00000192824 1111 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 Gm8197-202ENSMUST00000193422 934 ntBASIC8.69□□□□□ -1.02
Hoxd3P09027 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 Gm44323-201ENSMUST00000198689 129 ntBASIC8.69□□□□□ -1.02
Hoxd3P09027 Gm3726-201ENSMUST00000203110 785 ntBASIC8.69□□□□□ -1.02
Hoxd3P09027 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC8.69□□□□□ -1.02
Hoxd3P09027 3830406C13Rik-205ENSMUST00000223702 900 ntBASIC8.69□□□□□ -1.02
Hoxd3P09027 AC123658.1-201ENSMUST00000228364 867 ntBASIC8.69□□□□□ -1.02
Hoxd3P09027 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 Mettl21c-201ENSMUST00000061421 1086 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC8.69□□□□□ -1.02
Hoxd3P09027 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC8.69□□□□□ -1.02
Hoxd3P09027 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC8.69□□□□□ -1.02
Hoxd3P09027 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC8.69□□□□□ -1.02
Hoxd3P09027 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC8.69□□□□□ -1.02
Hoxd3P09027 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hoxd3P09027 Erich3-203ENSMUST00000189969 3460 ntBASIC8.68□□□□□ -1.02
Hoxd3P09027 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Hoxd3P09027 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Hoxd3P09027 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Hoxd3P09027 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Hoxd3P09027 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC8.68□□□□□ -1.02
Hoxd3P09027 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Hoxd3P09027 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Hoxd3P09027 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Hoxd3P09027 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Hoxd3P09027 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Hoxd3P09027 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC8.68□□□□□ -1.02
Hoxd3P09027 Gm44755-201ENSMUST00000207830 2102 ntBASIC8.68□□□□□ -1.02
Hoxd3P09027 AC124397.2-201ENSMUST00000225575 2215 ntBASIC8.68□□□□□ -1.02
Hoxd3P09027 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC8.68□□□□□ -1.02
Hoxd3P09027 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Hoxd3P09027 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Hoxd3P09027 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Hoxd3P09027 Gm4887-201ENSMUST00000122230 1053 ntBASIC8.68□□□□□ -1.02
Hoxd3P09027 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC8.68□□□□□ -1.02
Hoxd3P09027 Gm13206-201ENSMUST00000129579 1090 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Hoxd3P09027 1700019E08Rik-201ENSMUST00000134308 424 ntTSL 5 BASIC8.68□□□□□ -1.02
Hoxd3P09027 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC8.68□□□□□ -1.02
Hoxd3P09027 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Hoxd3P09027 Gm22143-201ENSMUST00000157401 203 ntBASIC8.68□□□□□ -1.02
Hoxd3P09027 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC8.68□□□□□ -1.02
Hoxd3P09027 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC8.68□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 117.4 ms