Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
H3f3cP02301 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
H3f3cP02301 Gm10417-201ENSMUST00000194341 3522 ntBASIC9.18□□□□□ -0.94
H3f3cP02301 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
H3f3cP02301 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
H3f3cP02301 Gm6158-201ENSMUST00000109467 904 ntBASIC9.18□□□□□ -0.94
H3f3cP02301 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
H3f3cP02301 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
H3f3cP02301 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC9.18□□□□□ -0.94
H3f3cP02301 Gm11380-201ENSMUST00000118067 560 ntBASIC9.18□□□□□ -0.94
H3f3cP02301 Gm13668-201ENSMUST00000119237 1001 ntBASIC9.18□□□□□ -0.94
H3f3cP02301 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC9.18□□□□□ -0.94
H3f3cP02301 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC9.18□□□□□ -0.94
H3f3cP02301 Gm12570-201ENSMUST00000122047 1030 ntBASIC9.18□□□□□ -0.94
H3f3cP02301 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
H3f3cP02301 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
H3f3cP02301 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC9.18□□□□□ -0.94
H3f3cP02301 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC9.18□□□□□ -0.94
H3f3cP02301 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
H3f3cP02301 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC9.18□□□□□ -0.94
H3f3cP02301 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
H3f3cP02301 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
H3f3cP02301 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
H3f3cP02301 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
H3f3cP02301 Gm26976-201ENSMUST00000182929 908 ntBASIC9.18□□□□□ -0.94
H3f3cP02301 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
H3f3cP02301 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC9.18□□□□□ -0.94
H3f3cP02301 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC9.18□□□□□ -0.94
H3f3cP02301 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC9.18□□□□□ -0.94
H3f3cP02301 Gm37852-201ENSMUST00000193027 350 ntBASIC9.18□□□□□ -0.94
H3f3cP02301 Gm42660-201ENSMUST00000197733 947 ntBASIC9.18□□□□□ -0.94
H3f3cP02301 Gm43334-201ENSMUST00000197740 1318 ntBASIC9.18□□□□□ -0.94
H3f3cP02301 Gm5865-201ENSMUST00000198713 637 ntBASIC9.18□□□□□ -0.94
H3f3cP02301 Gm42851-201ENSMUST00000201325 1411 ntBASIC9.18□□□□□ -0.94
H3f3cP02301 Gm18514-201ENSMUST00000218980 436 ntBASIC9.18□□□□□ -0.94
H3f3cP02301 Gm18968-201ENSMUST00000221319 862 ntBASIC9.18□□□□□ -0.94
H3f3cP02301 AC132901.1-201ENSMUST00000224345 508 ntBASIC9.18□□□□□ -0.94
H3f3cP02301 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC9.18□□□□□ -0.94
H3f3cP02301 BX649293.1-201ENSMUST00000227437 631 ntBASIC9.18□□□□□ -0.94
H3f3cP02301 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
H3f3cP02301 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
H3f3cP02301 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
H3f3cP02301 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
H3f3cP02301 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC9.18□□□□□ -0.94
H3f3cP02301 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC9.18□□□□□ -0.94
H3f3cP02301 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
H3f3cP02301 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
H3f3cP02301 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
H3f3cP02301 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
H3f3cP02301 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
H3f3cP02301 Limch1-202ENSMUST00000101164 5192 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
H3f3cP02301 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
H3f3cP02301 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
H3f3cP02301 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
H3f3cP02301 Gm10699-201ENSMUST00000098916 2130 ntBASIC9.17□□□□□ -0.94
H3f3cP02301 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
H3f3cP02301 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
H3f3cP02301 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
H3f3cP02301 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
H3f3cP02301 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
H3f3cP02301 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
H3f3cP02301 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
H3f3cP02301 Acss3-203ENSMUST00000165067 4696 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
H3f3cP02301 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
H3f3cP02301 Gm19680-201ENSMUST00000095050 1513 ntBASIC9.17□□□□□ -0.94
H3f3cP02301 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
H3f3cP02301 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
H3f3cP02301 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
H3f3cP02301 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
H3f3cP02301 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
H3f3cP02301 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC9.17□□□□□ -0.94
H3f3cP02301 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC9.17□□□□□ -0.94
H3f3cP02301 Gm5244-201ENSMUST00000164001 339 ntBASIC9.17□□□□□ -0.94
H3f3cP02301 Gm17192-201ENSMUST00000169031 511 ntBASIC9.17□□□□□ -0.94
H3f3cP02301 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
H3f3cP02301 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
H3f3cP02301 Gm18014-201ENSMUST00000183369 817 ntBASIC9.17□□□□□ -0.94
H3f3cP02301 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
H3f3cP02301 Gm28324-201ENSMUST00000187913 264 ntBASIC9.17□□□□□ -0.94
H3f3cP02301 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
H3f3cP02301 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
H3f3cP02301 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC9.17□□□□□ -0.94
H3f3cP02301 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
H3f3cP02301 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC9.17□□□□□ -0.94
H3f3cP02301 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
H3f3cP02301 AC164429.1-201ENSMUST00000224210 518 ntBASIC9.17□□□□□ -0.94
H3f3cP02301 Ap3s1-202ENSMUST00000224622 978 ntBASIC9.17□□□□□ -0.94
H3f3cP02301 Capsl-202ENSMUST00000226688 739 ntBASIC9.17□□□□□ -0.94
H3f3cP02301 AC154436.1-201ENSMUST00000227272 782 ntBASIC9.17□□□□□ -0.94
H3f3cP02301 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
H3f3cP02301 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
H3f3cP02301 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
H3f3cP02301 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC9.17□□□□□ -0.94
H3f3cP02301 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
H3f3cP02301 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
H3f3cP02301 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
H3f3cP02301 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
H3f3cP02301 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
H3f3cP02301 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
H3f3cP02301 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms