Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Itgb3O54890 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Itgb3O54890 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC11.3□□□□□ -0.6
Itgb3O54890 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Itgb3O54890 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Itgb3O54890 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Itgb3O54890 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC11.3□□□□□ -0.6
Itgb3O54890 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Itgb3O54890 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Itgb3O54890 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Itgb3O54890 Gm12397-201ENSMUST00000117674 615 ntBASIC11.3□□□□□ -0.6
Itgb3O54890 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC11.3□□□□□ -0.6
Itgb3O54890 Gm14052-201ENSMUST00000121434 1031 ntBASIC11.3□□□□□ -0.6
Itgb3O54890 Gm14006-201ENSMUST00000122132 981 ntBASIC11.3□□□□□ -0.6
Itgb3O54890 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC11.3□□□□□ -0.6
Itgb3O54890 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC11.3□□□□□ -0.6
Itgb3O54890 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC11.3□□□□□ -0.6
Itgb3O54890 Gm26208-201ENSMUST00000158677 124 ntBASIC11.3□□□□□ -0.6
Itgb3O54890 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Itgb3O54890 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC11.3□□□□□ -0.6
Itgb3O54890 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC11.3□□□□□ -0.6
Itgb3O54890 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Itgb3O54890 Gm9916-201ENSMUST00000192943 1228 ntBASIC11.3□□□□□ -0.6
Itgb3O54890 Gm5543-201ENSMUST00000193329 1091 ntBASIC11.3□□□□□ -0.6
Itgb3O54890 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Itgb3O54890 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC11.3□□□□□ -0.6
Itgb3O54890 Gm7939-201ENSMUST00000201233 1050 ntBASIC11.3□□□□□ -0.6
Itgb3O54890 BC080696-201ENSMUST00000202858 1218 ntBASIC11.3□□□□□ -0.6
Itgb3O54890 AC159376.1-201ENSMUST00000218504 630 ntBASIC11.3□□□□□ -0.6
Itgb3O54890 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC11.3□□□□□ -0.6
Itgb3O54890 AC174797.2-201ENSMUST00000225835 165 ntBASIC11.3□□□□□ -0.6
Itgb3O54890 Rps3a2-201ENSMUST00000074245 792 ntBASIC11.3□□□□□ -0.6
Itgb3O54890 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Itgb3O54890 n-R5s71-201ENSMUST00000093668 119 ntBASIC11.3□□□□□ -0.6
Itgb3O54890 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Itgb3O54890 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Itgb3O54890 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Itgb3O54890 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Itgb3O54890 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.3□□□□□ -0.6
Itgb3O54890 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Itgb3O54890 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.3□□□□□ -0.6
Itgb3O54890 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Itgb3O54890 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Itgb3O54890 Gm13169-201ENSMUST00000122090 1459 ntBASIC11.3□□□□□ -0.6
Itgb3O54890 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Itgb3O54890 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Itgb3O54890 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Itgb3O54890 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Itgb3O54890 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Itgb3O54890 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Itgb3O54890 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Itgb3O54890 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC11.29□□□□□ -0.6
Itgb3O54890 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Itgb3O54890 Gm42970-201ENSMUST00000196407 1352 ntBASIC11.29□□□□□ -0.6
Itgb3O54890 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Itgb3O54890 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Itgb3O54890 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Itgb3O54890 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.29□□□□□ -0.6
Itgb3O54890 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.29□□□□□ -0.6
Itgb3O54890 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Itgb3O54890 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Itgb3O54890 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Itgb3O54890 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Itgb3O54890 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Itgb3O54890 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.29□□□□□ -0.6
Itgb3O54890 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Itgb3O54890 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Itgb3O54890 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Itgb3O54890 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC11.29□□□□□ -0.6
Itgb3O54890 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Itgb3O54890 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Itgb3O54890 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Itgb3O54890 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC11.29□□□□□ -0.6
Itgb3O54890 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Itgb3O54890 Gm14274-201ENSMUST00000117182 615 ntBASIC11.29□□□□□ -0.6
Itgb3O54890 Gm15036-201ENSMUST00000118880 400 ntBASIC11.29□□□□□ -0.6
Itgb3O54890 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC11.29□□□□□ -0.6
Itgb3O54890 Gm20614-201ENSMUST00000177106 632 ntBASIC11.29□□□□□ -0.6
Itgb3O54890 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Itgb3O54890 Gm9625-201ENSMUST00000180422 955 ntBASIC11.29□□□□□ -0.6
Itgb3O54890 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Itgb3O54890 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Itgb3O54890 Gm17889-201ENSMUST00000198410 598 ntBASIC11.29□□□□□ -0.6
Itgb3O54890 Gm6855-201ENSMUST00000206307 790 ntBASIC11.29□□□□□ -0.6
Itgb3O54890 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Itgb3O54890 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Itgb3O54890 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC11.29□□□□□ -0.6
Itgb3O54890 AC142266.1-201ENSMUST00000228107 415 ntBASIC11.29□□□□□ -0.6
Itgb3O54890 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Itgb3O54890 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Itgb3O54890 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Itgb3O54890 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Itgb3O54890 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Itgb3O54890 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Itgb3O54890 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Itgb3O54890 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Itgb3O54890 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Itgb3O54890 Gm29101-201ENSMUST00000188329 1471 ntBASIC11.29□□□□□ -0.6
Itgb3O54890 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Itgb3O54890 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms