Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Serpina1e-202ENSMUST00000122229 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ccdc188F6WEU2 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Gpa33-204ENSMUST00000166860 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 AC140209.1-203ENSMUST00000227412 1524 ntBASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Mir683-2-201ENSMUST00000102099 109 ntBASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Scgb1b30-201ENSMUST00000108083 491 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Cox4i2-202ENSMUST00000109821 733 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Gm11225-201ENSMUST00000118903 1049 ntBASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Gm13405-201ENSMUST00000146769 708 ntTSL 3 BASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Mir683-1-201ENSMUST00000179371 109 ntBASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Plscr5-201ENSMUST00000179751 1191 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Atp5h-208ENSMUST00000180072 486 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Zfp572-201ENSMUST00000183674 1098 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Gm38258-201ENSMUST00000191792 675 ntTSL 3 BASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Gm43667-201ENSMUST00000198616 1095 ntBASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Gm31363-201ENSMUST00000199362 541 ntTSL 3 BASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Gm42599-201ENSMUST00000201308 469 ntBASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 AC167019.2-201ENSMUST00000227335 845 ntBASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Gm10250-201ENSMUST00000090488 482 ntBASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Mapk1ip1-202ENSMUST00000118810 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Ccdc188F6WEU2 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Bpifb2-201ENSMUST00000028983 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Ighv1-9-201ENSMUST00000103498 348 ntAPPRIS ALT2 BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 n-R5s51-201ENSMUST00000104473 123 ntBASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Gm15516-201ENSMUST00000117292 193 ntBASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Tspan2-202ENSMUST00000119902 961 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Gm6285-201ENSMUST00000122012 498 ntBASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Gm14138-201ENSMUST00000122061 745 ntBASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Pip5k1bos-201ENSMUST00000126936 684 ntTSL 3 BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 1700021N21Rik-201ENSMUST00000131110 904 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Gm16548-201ENSMUST00000133341 1226 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Gm13861-201ENSMUST00000137136 495 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Gm17120-201ENSMUST00000164734 743 ntTSL 3 BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Gm6695-201ENSMUST00000177264 1172 ntBASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 D7Ertd128e-201ENSMUST00000189744 928 ntTSL 2 BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 1600027J07Rik-201ENSMUST00000209501 489 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Gm45566-201ENSMUST00000209883 1168 ntBASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Gm45338-205ENSMUST00000210795 728 ntTSL 5 BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Gm19045-201ENSMUST00000222488 1193 ntBASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 AC154669.1-201ENSMUST00000224405 482 ntBASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Gm6028-201ENSMUST00000077111 574 ntBASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 H2al1j-201ENSMUST00000091180 330 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 CN725425-201ENSMUST00000109284 1929 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms