Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Gm5714-201ENSMUST00000197343 566 ntBASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Saa-ps-201ENSMUST00000211148 320 ntBASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Gm18212-201ENSMUST00000211678 889 ntBASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Zfp536-206ENSMUST00000176205 4372 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Sgo2b-201ENSMUST00000179944 3739 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Aph1b-201ENSMUST00000034934 4910 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Spocd1-201ENSMUST00000084263 3096 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Arhgef9-204ENSMUST00000113882 2445 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 E2f7-204ENSMUST00000173471 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 L1cam-201ENSMUST00000066576 4116 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Gm45837-201ENSMUST00000084894 4139 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 5330439K02Rik-201ENSMUST00000180953 2312 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Ptk2b-201ENSMUST00000022622 4034 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Gtpbp8-204ENSMUST00000162512 3415 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Gm43915-201ENSMUST00000203013 5037 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Stard13-201ENSMUST00000062015 5526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Npas4-201ENSMUST00000056129 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 1810041L15Rik-201ENSMUST00000080751 5917 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Ube4bQ9ES00 Trpv5-202ENSMUST00000193503 2025 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Zfp185-201ENSMUST00000114546 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Gm43135-201ENSMUST00000196442 3462 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Eng-205ENSMUST00000167841 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Ccdc136-209ENSMUST00000181464 3444 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Tmem255a-202ENSMUST00000089054 3311 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Atcay-201ENSMUST00000047408 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Ash2l-203ENSMUST00000110609 2300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Tle3-217ENSMUST00000162973 4114 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Tbc1d14-203ENSMUST00000126077 4085 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Pfkfb3-216ENSMUST00000191668 2216 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Slc35f6-201ENSMUST00000062962 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Tec-203ENSMUST00000113594 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Dpy19l2-201ENSMUST00000133010 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Gm14017-201ENSMUST00000121934 386 ntBASIC10.17□□□□□ -0.78
Ube4bQ9ES00 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Gm25881-201ENSMUST00000157783 103 ntBASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.17□□□□□ -0.78
Ube4bQ9ES00 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Olfml3-204ENSMUST00000169286 874 ntBASIC10.17□□□□□ -0.78
Ube4bQ9ES00 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Gm8100-201ENSMUST00000182906 988 ntBASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Gm45310-201ENSMUST00000210436 275 ntBASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 AC153961.1-201ENSMUST00000217760 385 ntBASIC10.17□□□□□ -0.78
Ube4bQ9ES00 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.17□□□□□ -0.78
Ube4bQ9ES00 5430437J10Rik-202ENSMUST00000227355 634 ntBASIC10.17□□□□□ -0.78
Ube4bQ9ES00 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Lipa-201ENSMUST00000049572 2969 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Dock4-204ENSMUST00000220912 7360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Gpatch4-201ENSMUST00000029707 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Adgrl2-208ENSMUST00000197567 5585 ntAPPRIS P2 TSL 2 BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Rpgrip1-213ENSMUST00000181401 3963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Nr2c1-201ENSMUST00000092213 2376 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Gm42962-201ENSMUST00000201966 2325 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Nsd2-201ENSMUST00000058096 4633 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Sema6a-203ENSMUST00000115449 6815 ntTSL 5 BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Gulo-201ENSMUST00000059970 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Slc26a1-202ENSMUST00000119270 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Slc26a1-204ENSMUST00000163328 3015 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC10.17□□□□□ -0.78
Ube4bQ9ES00 Tgm7-201ENSMUST00000110675 2151 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Celf4-202ENSMUST00000115816 3995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Dync1i1-201ENSMUST00000115554 2518 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Svil-203ENSMUST00000126977 7907 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Itgam-203ENSMUST00000106242 4649 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Gm37583-201ENSMUST00000195460 2487 ntBASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Adamtsl4-201ENSMUST00000015994 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms