Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Gm13333-201ENSMUST00000119424 781 ntBASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Gm8876-201ENSMUST00000120768 1122 ntBASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Gm5244-202ENSMUST00000189517 743 ntBASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Gm43097-201ENSMUST00000196867 151 ntBASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Gm9409-201ENSMUST00000197017 316 ntBASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Tas2r135-201ENSMUST00000070178 1093 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Gm18829-201ENSMUST00000188150 1622 ntBASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Bcl2-202ENSMUST00000189999 2841 ntBASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 AC154197.1-201ENSMUST00000225136 1382 ntBASIC10.14□□□□□ -0.79
Nkx6-1Q99MA9 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Gm9095-201ENSMUST00000117607 881 ntBASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Gm12435-201ENSMUST00000118949 1016 ntBASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Gm9097-201ENSMUST00000120514 880 ntBASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Gm15793-201ENSMUST00000121857 495 ntBASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Gm8525-201ENSMUST00000189674 861 ntBASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Gm21631-201ENSMUST00000195041 754 ntBASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Gm44304-201ENSMUST00000200509 145 ntBASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Gm8170-201ENSMUST00000218581 945 ntBASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Gm18042-201ENSMUST00000219887 790 ntBASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 AC102523.2-201ENSMUST00000227813 983 ntBASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx6-1Q99MA9 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms