Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm25922-201ENSMUST00000104281 130 ntBASIC10.07□□□□□ -0.8
Clrn1Q8K445 Gm14165-201ENSMUST00000121456 952 ntBASIC10.07□□□□□ -0.8
Clrn1Q8K445 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC10.07□□□□□ -0.8
Clrn1Q8K445 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Clrn1Q8K445 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC10.07□□□□□ -0.8
Clrn1Q8K445 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC10.07□□□□□ -0.8
Clrn1Q8K445 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Clrn1Q8K445 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Clrn1Q8K445 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Clrn1Q8K445 Gm24679-201ENSMUST00000158762 111 ntBASIC10.07□□□□□ -0.8
Clrn1Q8K445 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC10.07□□□□□ -0.8
Clrn1Q8K445 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Clrn1Q8K445 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC10.07□□□□□ -0.8
Clrn1Q8K445 Gm9116-201ENSMUST00000192400 1018 ntBASIC10.07□□□□□ -0.8
Clrn1Q8K445 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC10.07□□□□□ -0.8
Clrn1Q8K445 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC10.07□□□□□ -0.8
Clrn1Q8K445 Gm25053-202ENSMUST00000199731 132 ntBASIC10.07□□□□□ -0.8
Clrn1Q8K445 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
Clrn1Q8K445 Gm44155-201ENSMUST00000203923 412 ntBASIC10.07□□□□□ -0.8
Clrn1Q8K445 Gm45219-201ENSMUST00000205602 465 ntBASIC10.07□□□□□ -0.8
Clrn1Q8K445 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC10.07□□□□□ -0.8
Clrn1Q8K445 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Clrn1Q8K445 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Clrn1Q8K445 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Clrn1Q8K445 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Clrn1Q8K445 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Clrn1Q8K445 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Clrn1Q8K445 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Clrn1Q8K445 Gm20796-201ENSMUST00000180355 5838 ntBASIC10.07□□□□□ -0.8
Clrn1Q8K445 Fermt1-201ENSMUST00000038280 4915 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Clrn1Q8K445 Gm43334-201ENSMUST00000197740 1318 ntBASIC10.07□□□□□ -0.8
Clrn1Q8K445 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Clrn1Q8K445 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Clrn1Q8K445 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Smok4a-201ENSMUST00000074512 1455 ntBASIC10.06□□□□□ -0.8
Clrn1Q8K445 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Gm13445-201ENSMUST00000121664 307 ntBASIC10.06□□□□□ -0.8
Clrn1Q8K445 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Gm7719-201ENSMUST00000182374 975 ntBASIC10.06□□□□□ -0.8
Clrn1Q8K445 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Gm37028-201ENSMUST00000194276 107 ntBASIC10.06□□□□□ -0.8
Clrn1Q8K445 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Gm37102-201ENSMUST00000195740 1105 ntBASIC10.06□□□□□ -0.8
Clrn1Q8K445 Gm32111-201ENSMUST00000207689 846 ntBASIC10.06□□□□□ -0.8
Clrn1Q8K445 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC10.06□□□□□ -0.8
Clrn1Q8K445 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Epb41-204ENSMUST00000105970 5059 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Gm44740-201ENSMUST00000205603 1614 ntBASIC10.06□□□□□ -0.8
Clrn1Q8K445 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Clrn1Q8K445 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC10.06□□□□□ -0.8
Clrn1Q8K445 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC10.06□□□□□ -0.8
Clrn1Q8K445 AC153524.2-202ENSMUST00000220401 1794 ntBASIC10.06□□□□□ -0.8
Clrn1Q8K445 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Cdkl2-202ENSMUST00000086978 4066 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Clrn1Q8K445 Helz-202ENSMUST00000100305 5953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Clrn1Q8K445 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC10.05□□□□□ -0.8
Clrn1Q8K445 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Clrn1Q8K445 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
Clrn1Q8K445 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Clrn1Q8K445 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Clrn1Q8K445 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Clrn1Q8K445 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Clrn1Q8K445 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Clrn1Q8K445 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.05□□□□□ -0.8
Clrn1Q8K445 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Clrn1Q8K445 Ehmt1-202ENSMUST00000091348 4615 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Clrn1Q8K445 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Clrn1Q8K445 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC10.05□□□□□ -0.8
Clrn1Q8K445 Gm43052-201ENSMUST00000201451 1628 ntBASIC10.05□□□□□ -0.8
Clrn1Q8K445 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms