Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Gm44531-201ENSMUST00000208364 2000 ntBASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Olfr243-202ENSMUST00000215723 4735 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 AC158779.1-201ENSMUST00000228912 3861 ntBASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Gm10425-201ENSMUST00000181085 3364 ntTSL 2 BASIC10.52□□□□□ -0.72
Ccdc28bQ8CEG5 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Ccdc28bQ8CEG5 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Ccdc28bQ8CEG5 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Ccdc28bQ8CEG5 Olfr1199-204ENSMUST00000213138 2657 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Ccdc28bQ8CEG5 Grb2-204ENSMUST00000106499 2333 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Ccdc28bQ8CEG5 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Ccdc28bQ8CEG5 Rrp7a-201ENSMUST00000018184 4363 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Ccdc28bQ8CEG5 Gm37516-201ENSMUST00000192593 1954 ntBASIC10.52□□□□□ -0.72
Ccdc28bQ8CEG5 Ralgps2-202ENSMUST00000063199 2947 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Ccdc28bQ8CEG5 Calr4-204ENSMUST00000106631 2155 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Ccdc28bQ8CEG5 Gm12097-201ENSMUST00000121523 1414 ntBASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Idua-201ENSMUST00000071650 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Dhcr7-202ENSMUST00000124340 2556 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Il6st-210ENSMUST00000184949 2571 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Gm43052-201ENSMUST00000201451 1628 ntBASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Rbm10-204ENSMUST00000115374 3564 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Traf1-207ENSMUST00000172159 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Slco5a1-206ENSMUST00000147606 3615 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Gm12419-201ENSMUST00000116649 636 ntBASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Ptgds-201ENSMUST00000015234 901 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Gm44270-201ENSMUST00000203084 1234 ntBASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Gm6905-201ENSMUST00000205729 511 ntBASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Gm9619-201ENSMUST00000211587 762 ntBASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Gm5468-202ENSMUST00000227851 682 ntBASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 AC154589.2-201ENSMUST00000228847 251 ntBASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Mcm5-205ENSMUST00000212811 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Gys1-201ENSMUST00000003964 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Pla2g4e-201ENSMUST00000090071 4477 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Padi1-201ENSMUST00000026378 3754 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Zfp111-201ENSMUST00000056683 3380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Fgf14-201ENSMUST00000026631 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Rbm10-203ENSMUST00000084383 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Tubd1-205ENSMUST00000167178 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Pla1a-201ENSMUST00000002926 1972 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Fam161b-202ENSMUST00000065536 3000 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Gm6580-201ENSMUST00000117504 1357 ntBASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Srprb-201ENSMUST00000035157 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Ap2b1-201ENSMUST00000018875 5625 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc28bQ8CEG5 Slc12a6-204ENSMUST00000110991 4556 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Zfp446-201ENSMUST00000045810 4615 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Gm4900-201ENSMUST00000222046 1628 ntBASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Ncapd3-202ENSMUST00000086198 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Osbpl1a-204ENSMUST00000119043 2522 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 5830473C10Rik-201ENSMUST00000094615 2308 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Plscr4-201ENSMUST00000034941 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Ctnnd1-205ENSMUST00000111670 5047 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Gm26797-202ENSMUST00000213132 2562 ntTSL 5 BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Gm43517-201ENSMUST00000110746 3904 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Mup-ps26-201ENSMUST00000121751 202 ntBASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Gm5266-201ENSMUST00000187302 1162 ntBASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Gm44155-201ENSMUST00000203923 412 ntBASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Gm44914-201ENSMUST00000207191 2720 ntBASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms