Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim9Q8C7M3 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim9Q8C7M3 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC11.73□□□□□ -0.53
Trim9Q8C7M3 Gm16288-201ENSMUST00000137940 367 ntBASIC11.73□□□□□ -0.53
Trim9Q8C7M3 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC11.73□□□□□ -0.53
Trim9Q8C7M3 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim9Q8C7M3 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim9Q8C7M3 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trim9Q8C7M3 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim9Q8C7M3 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trim9Q8C7M3 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim9Q8C7M3 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim9Q8C7M3 Gm8022-201ENSMUST00000191763 904 ntBASIC11.73□□□□□ -0.53
Trim9Q8C7M3 Gm44498-201ENSMUST00000199509 111 ntBASIC11.73□□□□□ -0.53
Trim9Q8C7M3 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC11.73□□□□□ -0.53
Trim9Q8C7M3 Gm45719-201ENSMUST00000207954 1662 ntBASIC11.73□□□□□ -0.53
Trim9Q8C7M3 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim9Q8C7M3 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim9Q8C7M3 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim9Q8C7M3 Bbs7-201ENSMUST00000040148 2599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim9Q8C7M3 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim9Q8C7M3 Vwce-201ENSMUST00000055115 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim9Q8C7M3 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trim9Q8C7M3 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Trim9Q8C7M3 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trim9Q8C7M3 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim9Q8C7M3 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim9Q8C7M3 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim9Q8C7M3 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Gm43372-201ENSMUST00000202662 3016 ntBASIC11.72□□□□□ -0.53
Trim9Q8C7M3 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Gm43334-201ENSMUST00000197740 1318 ntBASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Gm9372-201ENSMUST00000168454 430 ntBASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Gm19587-201ENSMUST00000191395 545 ntBASIC11.72□□□□□ -0.53
Trim9Q8C7M3 4930517L18Rik-201ENSMUST00000191880 482 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Gm4430-202ENSMUST00000193902 1041 ntBASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Gm6352-201ENSMUST00000203583 1134 ntBASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Gm10752-201ENSMUST00000218348 729 ntBASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Ap3s1-202ENSMUST00000224622 978 ntBASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim9Q8C7M3 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trim9Q8C7M3 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trim9Q8C7M3 Gm8016-201ENSMUST00000221830 1575 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim9Q8C7M3 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim9Q8C7M3 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Trim9Q8C7M3 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim9Q8C7M3 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim9Q8C7M3 Sh3glb1-204ENSMUST00000199531 2584 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim9Q8C7M3 Gm8216-201ENSMUST00000117232 601 ntBASIC11.71□□□□□ -0.53
Trim9Q8C7M3 Gm11560-201ENSMUST00000117567 948 ntBASIC11.71□□□□□ -0.53
Trim9Q8C7M3 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC11.71□□□□□ -0.53
Trim9Q8C7M3 Gm12745-201ENSMUST00000121767 214 ntBASIC11.71□□□□□ -0.53
Trim9Q8C7M3 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim9Q8C7M3 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC11.71□□□□□ -0.53
Trim9Q8C7M3 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim9Q8C7M3 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC11.71□□□□□ -0.53
Trim9Q8C7M3 Gm25072-201ENSMUST00000175233 235 ntBASIC11.71□□□□□ -0.53
Trim9Q8C7M3 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC11.71□□□□□ -0.53
Trim9Q8C7M3 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC11.71□□□□□ -0.53
Trim9Q8C7M3 Thyn1-202ENSMUST00000213683 1107 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trim9Q8C7M3 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC11.71□□□□□ -0.53
Trim9Q8C7M3 AC102847.1-202ENSMUST00000226313 1245 ntBASIC11.71□□□□□ -0.53
Trim9Q8C7M3 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms