Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Rbbp6-201ENSMUST00000052135 6184 ntAPPRIS P2 TSL 5 BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Nsd3-201ENSMUST00000084026 9945 ntAPPRIS P2 TSL 2 BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Pms2-209ENSMUST00000148011 5482 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Serpina3m-201ENSMUST00000101078 1658 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Serpina3m-202ENSMUST00000168797 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Ctnnd1-202ENSMUST00000066177 5044 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Gm4810-201ENSMUST00000177721 1607 ntBASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Dnm3-201ENSMUST00000070330 4601 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Gm13045-201ENSMUST00000119019 712 ntBASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Gm15566-201ENSMUST00000121130 590 ntBASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Gm23699-201ENSMUST00000158835 135 ntBASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Gm9785-201ENSMUST00000062642 1006 ntBASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 0610030E20Rik-201ENSMUST00000077783 4605 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Tyw3-201ENSMUST00000052774 4490 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Gm37567-201ENSMUST00000193241 2279 ntBASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Gm40289-201ENSMUST00000201470 2268 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Anks1b-210ENSMUST00000182113 3553 ntTSL 5 BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Uroc1-201ENSMUST00000046128 3370 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Dock4-204ENSMUST00000220912 7360 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Mcf2-204ENSMUST00000228150 3336 ntAPPRIS ALT2 BASIC8.92□□□□□ -0.98
Tsen54Q8C2A2 Dlgap2-208ENSMUST00000150247 3138 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 AC159819.3-201ENSMUST00000216940 1837 ntBASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Thbs3-202ENSMUST00000119084 2993 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 St3gal6-207ENSMUST00000137035 4123 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Acer2-202ENSMUST00000084433 4060 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Cish-201ENSMUST00000085102 2850 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Adam22-204ENSMUST00000088761 9077 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Prdx6-202ENSMUST00000071718 2387 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Gm26670-201ENSMUST00000180429 3287 ntBASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Dis3l2-202ENSMUST00000168237 3154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Fgf14-201ENSMUST00000026631 3180 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Gm37084-201ENSMUST00000191688 5898 ntBASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Gm12579-201ENSMUST00000118040 783 ntBASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Gm13611-201ENSMUST00000118269 318 ntBASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Gm15432-201ENSMUST00000121106 195 ntBASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Gm20426-201ENSMUST00000173657 440 ntBASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Gm45113-201ENSMUST00000207518 165 ntBASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Thyn1-202ENSMUST00000213683 1107 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 AC122891.1-201ENSMUST00000218671 268 ntBASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 Zfp532-201ENSMUST00000049016 5503 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Tsen54Q8C2A2 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms