Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Lypla1-203ENSMUST00000119612 529 ntTSL 3 BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Gm13445-201ENSMUST00000121664 307 ntBASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Gm9135-201ENSMUST00000182963 990 ntBASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Gm37390-201ENSMUST00000192452 872 ntBASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Gm5543-201ENSMUST00000193329 1091 ntBASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Gm44545-201ENSMUST00000208262 746 ntBASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Gm18035-201ENSMUST00000211962 589 ntBASIC10.98□□□□□ -0.65
Trub1Q8C0D0 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Prrxl1-205ENSMUST00000228878 723 ntBASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Gm44056-201ENSMUST00000204623 1427 ntBASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Gm42858-201ENSMUST00000202512 1704 ntBASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trub1Q8C0D0 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trub1Q8C0D0 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC10.97□□□□□ -0.65
Trub1Q8C0D0 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trub1Q8C0D0 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trub1Q8C0D0 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trub1Q8C0D0 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trub1Q8C0D0 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trub1Q8C0D0 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trub1Q8C0D0 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trub1Q8C0D0 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trub1Q8C0D0 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.97□□□□□ -0.65
Trub1Q8C0D0 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trub1Q8C0D0 Gm22582-201ENSMUST00000102283 94 ntBASIC10.97□□□□□ -0.65
Trub1Q8C0D0 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trub1Q8C0D0 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trub1Q8C0D0 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trub1Q8C0D0 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC10.97□□□□□ -0.65
Trub1Q8C0D0 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC10.97□□□□□ -0.65
Trub1Q8C0D0 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC10.97□□□□□ -0.65
Trub1Q8C0D0 Gm5189-201ENSMUST00000221796 261 ntBASIC10.97□□□□□ -0.65
Trub1Q8C0D0 AC157650.1-201ENSMUST00000224582 610 ntBASIC10.97□□□□□ -0.65
Trub1Q8C0D0 CT009713.2-201ENSMUST00000225532 1149 ntBASIC10.97□□□□□ -0.65
Trub1Q8C0D0 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Trub1Q8C0D0 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trub1Q8C0D0 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trub1Q8C0D0 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trub1Q8C0D0 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trub1Q8C0D0 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trub1Q8C0D0 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trub1Q8C0D0 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC10.97□□□□□ -0.65
Trub1Q8C0D0 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trub1Q8C0D0 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trub1Q8C0D0 Toe1-201ENSMUST00000030451 2090 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trub1Q8C0D0 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trub1Q8C0D0 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trub1Q8C0D0 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trub1Q8C0D0 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trub1Q8C0D0 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trub1Q8C0D0 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trub1Q8C0D0 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trub1Q8C0D0 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trub1Q8C0D0 Nln-205ENSMUST00000224945 2486 ntBASIC10.96□□□□□ -0.65
Trub1Q8C0D0 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trub1Q8C0D0 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trub1Q8C0D0 AC125351.1-201ENSMUST00000221438 2223 ntBASIC10.96□□□□□ -0.65
Trub1Q8C0D0 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trub1Q8C0D0 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trub1Q8C0D0 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trub1Q8C0D0 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trub1Q8C0D0 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC10.96□□□□□ -0.65
Trub1Q8C0D0 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trub1Q8C0D0 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trub1Q8C0D0 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Trub1Q8C0D0 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trub1Q8C0D0 Ankrd36-201ENSMUST00000109855 1363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trub1Q8C0D0 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC10.96□□□□□ -0.65
Trub1Q8C0D0 C030014I23Rik-204ENSMUST00000217463 1370 ntTSL 5 BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms