Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Gm14006-201ENSMUST00000122132 981 ntBASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Gm15258-201ENSMUST00000153801 741 ntBASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Zcwpw2-203ENSMUST00000187803 372 ntBASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Gm38038-201ENSMUST00000193803 259 ntBASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 CT025603.1-201ENSMUST00000224040 448 ntBASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Gm42851-201ENSMUST00000201325 1411 ntBASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh3rf2Q8BZT2 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Gm45675-201ENSMUST00000211202 3429 ntBASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Gm5909-201ENSMUST00000119768 1281 ntBASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Gm26208-201ENSMUST00000158677 124 ntBASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Gm37688-201ENSMUST00000195195 465 ntBASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Gm5881-201ENSMUST00000204737 367 ntBASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Gm6331-201ENSMUST00000217890 450 ntBASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 AC116797.2-202ENSMUST00000223587 1017 ntBASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Gm14005-208ENSMUST00000223654 681 ntBASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Gm8873-201ENSMUST00000217847 1439 ntBASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Gm21142-201ENSMUST00000179999 2604 ntBASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh3rf2Q8BZT2 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Gm37697-201ENSMUST00000195680 1844 ntBASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Gm11573-201ENSMUST00000119956 394 ntBASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sh3rf2Q8BZT2 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms