Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Mir3102-201ENSMUST00000175555 104 ntBASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Mir8091-201ENSMUST00000183602 139 ntBASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Gm43380-201ENSMUST00000200421 220 ntBASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Gm8170-201ENSMUST00000218581 945 ntBASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Gm5189-201ENSMUST00000221796 261 ntBASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 AC164429.1-201ENSMUST00000224210 518 ntBASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Plekhb2-201ENSMUST00000027297 3279 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Gm10417-201ENSMUST00000194341 3522 ntBASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Vwce-201ENSMUST00000055115 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Gm29222-201ENSMUST00000185442 2167 ntTSL 5 BASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Gm29449-201ENSMUST00000187820 2168 ntTSL 5 BASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Gm28104-201ENSMUST00000188331 2168 ntTSL 5 BASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Gm28743-201ENSMUST00000189014 2168 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Gm29384-201ENSMUST00000190852 2168 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Gm37538-201ENSMUST00000192417 2168 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Gm44106-201ENSMUST00000203153 1599 ntBASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Rxfp2-202ENSMUST00000110496 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rad54bQ6PFE3 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 Plscr2-205ENSMUST00000180154 1900 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 Gm12274-201ENSMUST00000120062 385 ntBASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 Gm23771-201ENSMUST00000178702 110 ntBASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 Gm37466-201ENSMUST00000195692 652 ntBASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 Gm44814-201ENSMUST00000207018 434 ntBASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 AC154305.2-201ENSMUST00000225813 901 ntBASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 Cd300lg-202ENSMUST00000107163 2605 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 C030014I23Rik-204ENSMUST00000217463 1370 ntTSL 5 BASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 P3h1-202ENSMUST00000081606 2820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 Gal3st2-201ENSMUST00000094663 2844 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 AC130823.1-201ENSMUST00000228929 1549 ntBASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 Gpm6b-206ENSMUST00000112228 3083 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 Il1f5-206ENSMUST00000168941 1722 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 Trim69-201ENSMUST00000036089 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 Gm43014-201ENSMUST00000198568 2443 ntBASIC10.72□□□□□ -0.69
Rad54bQ6PFE3 Gm10857-201ENSMUST00000195343 2794 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Rad54bQ6PFE3 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rad54bQ6PFE3 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rad54bQ6PFE3 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Rad54bQ6PFE3 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rad54bQ6PFE3 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rad54bQ6PFE3 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rad54bQ6PFE3 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rad54bQ6PFE3 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rad54bQ6PFE3 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Rad54bQ6PFE3 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rad54bQ6PFE3 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rad54bQ6PFE3 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC10.71□□□□□ -0.69
Rad54bQ6PFE3 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Rad54bQ6PFE3 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rad54bQ6PFE3 Gm11980-201ENSMUST00000121445 986 ntBASIC10.71□□□□□ -0.69
Rad54bQ6PFE3 Pde4d-209ENSMUST00000122041 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rad54bQ6PFE3 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Rad54bQ6PFE3 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
Rad54bQ6PFE3 Pde9a-206ENSMUST00000134525 1818 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Rad54bQ6PFE3 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms