Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Nrap-205ENSMUST00000167239 4752 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Gm43372-201ENSMUST00000202662 3016 ntBASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.35□□□□□ -0.59
Syne3Q4FZC9 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Gm43334-201ENSMUST00000197740 1318 ntBASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Fermt1-201ENSMUST00000038280 4915 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Gm11422-201ENSMUST00000118925 1103 ntBASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Mir1893-201ENSMUST00000122565 83 ntBASIC11.34□□□□□ -0.59
Syne3Q4FZC9 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Gm7082-201ENSMUST00000209880 969 ntBASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Gm43307-201ENSMUST00000199465 2371 ntBASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Gfra2-203ENSMUST00000227697 1323 ntBASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Syne3Q4FZC9 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Syne3Q4FZC9 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.59
Syne3Q4FZC9 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Syne3Q4FZC9 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Syne3Q4FZC9 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Syne3Q4FZC9 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Gm12795-201ENSMUST00000117594 539 ntBASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC11.33□□□□□ -0.6
Syne3Q4FZC9 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Gm5529-201ENSMUST00000165691 891 ntBASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Mipep-ps-201ENSMUST00000177439 291 ntBASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Gm8492-201ENSMUST00000182375 987 ntBASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Gm9116-201ENSMUST00000192400 1018 ntBASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Gm42859-201ENSMUST00000199572 193 ntBASIC11.33□□□□□ -0.6
Syne3Q4FZC9 AC154436.1-201ENSMUST00000227272 782 ntBASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Gm5805-201ENSMUST00000072779 456 ntBASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Syne3Q4FZC9 AC154528.2-201ENSMUST00000228432 3023 ntBASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Gm20796-201ENSMUST00000180355 5838 ntBASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Gm6768-201ENSMUST00000022467 1878 ntBASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC11.33□□□□□ -0.6
Syne3Q4FZC9 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Syne3Q4FZC9 AC122382.1-201ENSMUST00000225869 2371 ntBASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms