Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Chrna5Q2MKA5 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 Gm26953-209ENSMUST00000213051 2087 ntTSL 5 BASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 Gm45110-201ENSMUST00000205704 1402 ntBASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 Rplp1-ps1-201ENSMUST00000119410 345 ntBASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 Gm13778-202ENSMUST00000146633 537 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 Gm19668-201ENSMUST00000178581 747 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 Pou1f1-205ENSMUST00000184525 1020 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 Gm5865-201ENSMUST00000198713 637 ntBASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 Rassf6-205ENSMUST00000202704 1178 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 Gm44155-201ENSMUST00000203923 412 ntBASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 Gm2696-201ENSMUST00000220062 723 ntAPPRIS P5 BASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 AC149294.3-201ENSMUST00000226888 732 ntBASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 CT025618.1-201ENSMUST00000227409 1279 ntBASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 AC114585.2-201ENSMUST00000227693 486 ntBASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 AC123061.1-201ENSMUST00000228021 999 ntBASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna5Q2MKA5 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Chrna5Q2MKA5 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Chrna5Q2MKA5 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna5Q2MKA5 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna5Q2MKA5 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna5Q2MKA5 Gm44664-201ENSMUST00000206841 1786 ntBASIC12.64□□□□□ -0.39
Chrna5Q2MKA5 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna5Q2MKA5 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna5Q2MKA5 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna5Q2MKA5 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna5Q2MKA5 Gm7823-201ENSMUST00000120761 1623 ntBASIC12.64□□□□□ -0.39
Chrna5Q2MKA5 Gm38227-201ENSMUST00000193036 1602 ntBASIC12.64□□□□□ -0.39
Chrna5Q2MKA5 Use1-203ENSMUST00000110054 973 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna5Q2MKA5 Banf2os-201ENSMUST00000124061 771 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna5Q2MKA5 Gm13554-201ENSMUST00000137349 477 ntTSL 5 BASIC12.64□□□□□ -0.39
Chrna5Q2MKA5 Gm16252-201ENSMUST00000144420 857 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna5Q2MKA5 Gm22763-201ENSMUST00000158374 107 ntBASIC12.64□□□□□ -0.39
Chrna5Q2MKA5 Gm7672-201ENSMUST00000180915 872 ntBASIC12.64□□□□□ -0.39
Chrna5Q2MKA5 Gm28809-201ENSMUST00000187542 782 ntTSL 5 BASIC12.64□□□□□ -0.39
Chrna5Q2MKA5 Gm38191-201ENSMUST00000194509 770 ntTSL 5 BASIC12.64□□□□□ -0.39
Chrna5Q2MKA5 AC132881.1-201ENSMUST00000223780 1062 ntBASIC12.64□□□□□ -0.39
Chrna5Q2MKA5 Taar1-201ENSMUST00000051532 1114 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Chrna5Q2MKA5 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna5Q2MKA5 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna5Q2MKA5 Gm8991-201ENSMUST00000073014 1075 ntBASIC12.64□□□□□ -0.39
Chrna5Q2MKA5 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna5Q2MKA5 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna5Q2MKA5 Gm45675-201ENSMUST00000211202 3429 ntBASIC12.64□□□□□ -0.39
Chrna5Q2MKA5 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Chrna5Q2MKA5 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna5Q2MKA5 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna5Q2MKA5 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna5Q2MKA5 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna5Q2MKA5 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna5Q2MKA5 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Chrna5Q2MKA5 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna5Q2MKA5 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Chrna5Q2MKA5 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Chrna5Q2MKA5 Babam2-202ENSMUST00000071531 1308 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chrna5Q2MKA5 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Chrna5Q2MKA5 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chrna5Q2MKA5 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.63□□□□□ -0.39
Chrna5Q2MKA5 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chrna5Q2MKA5 AC158777.1-201ENSMUST00000226216 1724 ntBASIC12.63□□□□□ -0.39
Chrna5Q2MKA5 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC12.63□□□□□ -0.39
Chrna5Q2MKA5 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.63□□□□□ -0.39
Chrna5Q2MKA5 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Chrna5Q2MKA5 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC12.63□□□□□ -0.39
Chrna5Q2MKA5 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chrna5Q2MKA5 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Chrna5Q2MKA5 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Chrna5Q2MKA5 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chrna5Q2MKA5 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chrna5Q2MKA5 Gm16439-201ENSMUST00000100687 564 ntBASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms