Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm43275-201ENSMUST00000202053 1020 ntBASIC10.89□□□□□ -0.67
Ebf1Q07802 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf1Q07802 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf1Q07802 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Ebf1Q07802 AC129217.1-201ENSMUST00000225181 642 ntBASIC10.89□□□□□ -0.67
Ebf1Q07802 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf1Q07802 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf1Q07802 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf1Q07802 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf1Q07802 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf1Q07802 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf1Q07802 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf1Q07802 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf1Q07802 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Ebf1Q07802 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf1Q07802 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf1Q07802 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf1Q07802 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf1Q07802 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf1Q07802 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Ebf1Q07802 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf1Q07802 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf1Q07802 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf1Q07802 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ebf1Q07802 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf1Q07802 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Ebf1Q07802 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf1Q07802 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.88□□□□□ -0.67
Ebf1Q07802 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf1Q07802 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Ebf1Q07802 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC10.88□□□□□ -0.67
Ebf1Q07802 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf1Q07802 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.88□□□□□ -0.67
Ebf1Q07802 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Ebf1Q07802 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.88□□□□□ -0.67
Ebf1Q07802 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf1Q07802 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Ebf1Q07802 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Ebf1Q07802 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf1Q07802 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf1Q07802 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf1Q07802 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf1Q07802 Ighv13-1-201ENSMUST00000103480 294 ntBASIC10.88□□□□□ -0.67
Ebf1Q07802 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC10.88□□□□□ -0.67
Ebf1Q07802 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf1Q07802 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf1Q07802 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf1Q07802 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf1Q07802 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
Ebf1Q07802 Mir1249-201ENSMUST00000116791 98 ntBASIC10.88□□□□□ -0.67
Ebf1Q07802 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Ebf1Q07802 Gm5808-201ENSMUST00000178090 357 ntBASIC10.88□□□□□ -0.67
Ebf1Q07802 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC10.88□□□□□ -0.67
Ebf1Q07802 Gm8756-201ENSMUST00000183250 929 ntBASIC10.88□□□□□ -0.67
Ebf1Q07802 Gm27316-201ENSMUST00000184884 277 ntBASIC10.88□□□□□ -0.67
Ebf1Q07802 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf1Q07802 Zcwpw2-203ENSMUST00000187803 372 ntBASIC10.88□□□□□ -0.67
Ebf1Q07802 Wbp1-209ENSMUST00000205023 716 ntBASIC10.88□□□□□ -0.67
Ebf1Q07802 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC10.88□□□□□ -0.67
Ebf1Q07802 AC154759.1-201ENSMUST00000224137 1159 ntBASIC10.88□□□□□ -0.67
Ebf1Q07802 AC134913.2-201ENSMUST00000225017 771 ntBASIC10.88□□□□□ -0.67
Ebf1Q07802 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf1Q07802 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf1Q07802 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Ebf1Q07802 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Ebf1Q07802 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf1Q07802 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf1Q07802 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf1Q07802 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf1Q07802 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Ebf1Q07802 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf1Q07802 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf1Q07802 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf1Q07802 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Ebf1Q07802 Gm19027-201ENSMUST00000187291 1355 ntBASIC10.88□□□□□ -0.67
Ebf1Q07802 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf1Q07802 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf1Q07802 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf1Q07802 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf1Q07802 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ebf1Q07802 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf1Q07802 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf1Q07802 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf1Q07802 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf1Q07802 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf1Q07802 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.87□□□□□ -0.67
Ebf1Q07802 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.87□□□□□ -0.67
Ebf1Q07802 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf1Q07802 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf1Q07802 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf1Q07802 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf1Q07802 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf1Q07802 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf1Q07802 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Ebf1Q07802 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf1Q07802 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf1Q07802 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Ebf1Q07802 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf1Q07802 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ebf1Q07802 Gm16288-201ENSMUST00000137940 367 ntBASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms