Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a2Q07643 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC11.57□□□□□ -0.56
Col9a2Q07643 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a2Q07643 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a2Q07643 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a2Q07643 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col9a2Q07643 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Col9a2Q07643 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a2Q07643 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a2Q07643 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a2Q07643 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a2Q07643 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a2Q07643 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a2Q07643 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a2Q07643 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a2Q07643 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a2Q07643 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Col9a2Q07643 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a2Q07643 Gm6783-201ENSMUST00000120916 1437 ntBASIC11.56□□□□□ -0.56
Col9a2Q07643 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a2Q07643 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a2Q07643 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a2Q07643 Gm6612-201ENSMUST00000170777 395 ntBASIC11.56□□□□□ -0.56
Col9a2Q07643 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC11.56□□□□□ -0.56
Col9a2Q07643 Gm7539-201ENSMUST00000189789 630 ntBASIC11.56□□□□□ -0.56
Col9a2Q07643 Gm43811-201ENSMUST00000202862 695 ntBASIC11.56□□□□□ -0.56
Col9a2Q07643 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.56□□□□□ -0.56
Col9a2Q07643 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC11.56□□□□□ -0.56
Col9a2Q07643 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC11.56□□□□□ -0.56
Col9a2Q07643 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a2Q07643 CT010505.2-201ENSMUST00000227918 998 ntBASIC11.56□□□□□ -0.56
Col9a2Q07643 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a2Q07643 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Col9a2Q07643 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC11.56□□□□□ -0.56
Col9a2Q07643 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Col9a2Q07643 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Col9a2Q07643 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a2Q07643 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a2Q07643 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Col9a2Q07643 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a2Q07643 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a2Q07643 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Col9a2Q07643 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a2Q07643 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Col9a2Q07643 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a2Q07643 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a2Q07643 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a2Q07643 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.56□□□□□ -0.56
Col9a2Q07643 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Col9a2Q07643 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a2Q07643 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a2Q07643 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a2Q07643 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col9a2Q07643 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Col9a2Q07643 Camk2g-202ENSMUST00000080440 3604 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a2Q07643 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a2Q07643 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a2Q07643 Gm37036-201ENSMUST00000192836 2506 ntBASIC11.55□□□□□ -0.56
Col9a2Q07643 Gm45501-201ENSMUST00000211468 2526 ntBASIC11.55□□□□□ -0.56
Col9a2Q07643 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a2Q07643 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a2Q07643 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Col9a2Q07643 AC124561.1-202ENSMUST00000228652 1929 ntBASIC11.55□□□□□ -0.56
Col9a2Q07643 Gm13120-201ENSMUST00000117343 1446 ntBASIC11.55□□□□□ -0.56
Col9a2Q07643 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Col9a2Q07643 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Col9a2Q07643 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a2Q07643 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a2Q07643 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a2Q07643 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Col9a2Q07643 Gm24933-201ENSMUST00000103762 110 ntBASIC11.55□□□□□ -0.56
Col9a2Q07643 Gm23252-201ENSMUST00000103776 110 ntBASIC11.55□□□□□ -0.56
Col9a2Q07643 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC11.55□□□□□ -0.56
Col9a2Q07643 Gm6238-201ENSMUST00000120999 465 ntBASIC11.55□□□□□ -0.56
Col9a2Q07643 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC11.55□□□□□ -0.56
Col9a2Q07643 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC11.55□□□□□ -0.56
Col9a2Q07643 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC11.55□□□□□ -0.56
Col9a2Q07643 Gm15258-201ENSMUST00000153801 741 ntBASIC11.55□□□□□ -0.56
Col9a2Q07643 Gm24078-201ENSMUST00000158184 103 ntBASIC11.55□□□□□ -0.56
Col9a2Q07643 Gm26443-201ENSMUST00000179610 110 ntBASIC11.55□□□□□ -0.56
Col9a2Q07643 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a2Q07643 Mir6953-201ENSMUST00000184745 68 ntBASIC11.55□□□□□ -0.56
Col9a2Q07643 Gm37301-201ENSMUST00000195412 568 ntBASIC11.55□□□□□ -0.56
Col9a2Q07643 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC11.55□□□□□ -0.56
Col9a2Q07643 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC11.55□□□□□ -0.56
Col9a2Q07643 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Col9a2Q07643 Gm44236-201ENSMUST00000204492 513 ntBASIC11.55□□□□□ -0.56
Col9a2Q07643 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a2Q07643 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a2Q07643 Gm34983-202ENSMUST00000220432 494 ntTSL 3 BASIC11.55□□□□□ -0.56
Col9a2Q07643 AC149294.3-201ENSMUST00000226888 732 ntBASIC11.55□□□□□ -0.56
Col9a2Q07643 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC11.55□□□□□ -0.56
Col9a2Q07643 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Col9a2Q07643 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a2Q07643 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a2Q07643 Mir194-2-201ENSMUST00000083648 86 ntBASIC11.55□□□□□ -0.56
Col9a2Q07643 Dcstamp-201ENSMUST00000022913 1997 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a2Q07643 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Col9a2Q07643 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col9a2Q07643 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms