Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Olfr1232-202ENSMUST00000213860 2413 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Hmgb1P63158 4930455D15Rik-201ENSMUST00000181632 1616 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgb1P63158 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Hmgb1P63158 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgb1P63158 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.81□□□□□ -0.52
Hmgb1P63158 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgb1P63158 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgb1P63158 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgb1P63158 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgb1P63158 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgb1P63158 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgb1P63158 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgb1P63158 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hmgb1P63158 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgb1P63158 Gm37873-201ENSMUST00000194571 2280 ntBASIC11.8□□□□□ -0.52
Hmgb1P63158 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hmgb1P63158 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgb1P63158 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgb1P63158 Zic3-201ENSMUST00000088627 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgb1P63158 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgb1P63158 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgb1P63158 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.8□□□□□ -0.52
Hmgb1P63158 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.8□□□□□ -0.52
Hmgb1P63158 Gm12389-201ENSMUST00000117696 418 ntBASIC11.8□□□□□ -0.52
Hmgb1P63158 Gm14612-201ENSMUST00000121522 881 ntBASIC11.8□□□□□ -0.52
Hmgb1P63158 Gm11434-201ENSMUST00000122379 629 ntBASIC11.8□□□□□ -0.52
Hmgb1P63158 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.8□□□□□ -0.52
Hmgb1P63158 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgb1P63158 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC11.8□□□□□ -0.52
Hmgb1P63158 B9d1os-201ENSMUST00000137010 674 ntBASIC11.8□□□□□ -0.52
Hmgb1P63158 Gm7696-201ENSMUST00000174727 907 ntBASIC11.8□□□□□ -0.52
Hmgb1P63158 Gm37466-201ENSMUST00000195692 652 ntBASIC11.8□□□□□ -0.52
Hmgb1P63158 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgb1P63158 Gm43520-201ENSMUST00000197996 164 ntBASIC11.8□□□□□ -0.52
Hmgb1P63158 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.8□□□□□ -0.52
Hmgb1P63158 Gm9102-201ENSMUST00000219250 465 ntBASIC11.8□□□□□ -0.52
Hmgb1P63158 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgb1P63158 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Hmgb1P63158 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.8□□□□□ -0.52
Hmgb1P63158 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgb1P63158 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgb1P63158 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgb1P63158 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgb1P63158 Gm5159-201ENSMUST00000212733 1652 ntBASIC11.8□□□□□ -0.52
Hmgb1P63158 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgb1P63158 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hmgb1P63158 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgb1P63158 Gm5592-201ENSMUST00000097044 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgb1P63158 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgb1P63158 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC11.8□□□□□ -0.52
Hmgb1P63158 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC11.8□□□□□ -0.52
Hmgb1P63158 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC11.8□□□□□ -0.52
Hmgb1P63158 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC11.8□□□□□ -0.52
Hmgb1P63158 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgb1P63158 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hmgb1P63158 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Hmgb1P63158 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgb1P63158 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgb1P63158 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hmgb1P63158 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgb1P63158 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgb1P63158 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgb1P63158 AC122382.1-201ENSMUST00000225869 2371 ntBASIC11.79□□□□□ -0.52
Hmgb1P63158 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgb1P63158 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Hmgb1P63158 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgb1P63158 Gm37058-201ENSMUST00000193393 1644 ntBASIC11.79□□□□□ -0.52
Hmgb1P63158 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgb1P63158 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgb1P63158 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Hmgb1P63158 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgb1P63158 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgb1P63158 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgb1P63158 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgb1P63158 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC11.79□□□□□ -0.52
Hmgb1P63158 AC132412.1-201ENSMUST00000204155 2724 ntBASIC11.79□□□□□ -0.52
Hmgb1P63158 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgb1P63158 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgb1P63158 Gm12274-201ENSMUST00000120062 385 ntBASIC11.79□□□□□ -0.52
Hmgb1P63158 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.79□□□□□ -0.52
Hmgb1P63158 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgb1P63158 Gm9211-201ENSMUST00000182882 975 ntBASIC11.79□□□□□ -0.52
Hmgb1P63158 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgb1P63158 Gm30671-201ENSMUST00000214898 318 ntBASIC11.79□□□□□ -0.52
Hmgb1P63158 AC166992.1-201ENSMUST00000216356 565 ntBASIC11.79□□□□□ -0.52
Hmgb1P63158 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC11.79□□□□□ -0.52
Hmgb1P63158 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.79□□□□□ -0.52
Hmgb1P63158 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgb1P63158 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgb1P63158 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgb1P63158 Gm8036-201ENSMUST00000118089 1718 ntBASIC11.79□□□□□ -0.52
Hmgb1P63158 Gm44103-201ENSMUST00000204364 3662 ntBASIC11.79□□□□□ -0.52
Hmgb1P63158 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgb1P63158 Ap2b1-201ENSMUST00000018875 5625 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgb1P63158 Gm44951-201ENSMUST00000206449 2024 ntBASIC11.79□□□□□ -0.52
Hmgb1P63158 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgb1P63158 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgb1P63158 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hmgb1P63158 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Hmgb1P63158 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms