Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ybx1P62960 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Ybx1P62960 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Ybx1P62960 Gm12397-201ENSMUST00000117674 615 ntBASIC10.97□□□□□ -0.65
Ybx1P62960 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC10.97□□□□□ -0.65
Ybx1P62960 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC10.97□□□□□ -0.65
Ybx1P62960 Gm22876-201ENSMUST00000175450 298 ntBASIC10.97□□□□□ -0.65
Ybx1P62960 Gm20091-201ENSMUST00000179683 189 ntBASIC10.97□□□□□ -0.65
Ybx1P62960 Gm5976-201ENSMUST00000180794 996 ntBASIC10.97□□□□□ -0.65
Ybx1P62960 Gm6644-201ENSMUST00000186507 951 ntBASIC10.97□□□□□ -0.65
Ybx1P62960 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC10.97□□□□□ -0.65
Ybx1P62960 Gm7255-201ENSMUST00000187371 908 ntBASIC10.97□□□□□ -0.65
Ybx1P62960 Gm37858-201ENSMUST00000192759 1231 ntBASIC10.97□□□□□ -0.65
Ybx1P62960 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC10.97□□□□□ -0.65
Ybx1P62960 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ybx1P62960 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC10.97□□□□□ -0.65
Ybx1P62960 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC10.97□□□□□ -0.65
Ybx1P62960 AC125409.3-201ENSMUST00000223488 653 ntBASIC10.97□□□□□ -0.65
Ybx1P62960 AC187103.3-201ENSMUST00000225725 646 ntBASIC10.97□□□□□ -0.65
Ybx1P62960 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Ybx1P62960 Gm22341-201ENSMUST00000083775 129 ntBASIC10.97□□□□□ -0.65
Ybx1P62960 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ybx1P62960 AC154197.1-201ENSMUST00000225136 1382 ntBASIC10.97□□□□□ -0.65
Ybx1P62960 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.97□□□□□ -0.65
Ybx1P62960 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ybx1P62960 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC10.97□□□□□ -0.65
Ybx1P62960 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ybx1P62960 AC149588.2-201ENSMUST00000228182 1859 ntBASIC10.97□□□□□ -0.65
Ybx1P62960 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ybx1P62960 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.97□□□□□ -0.65
Ybx1P62960 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ybx1P62960 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ybx1P62960 Gm42602-201ENSMUST00000200288 3224 ntBASIC10.97□□□□□ -0.65
Ybx1P62960 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ybx1P62960 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Ybx1P62960 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ybx1P62960 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ybx1P62960 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ybx1P62960 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ybx1P62960 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Ybx1P62960 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ybx1P62960 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ybx1P62960 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
Ybx1P62960 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ybx1P62960 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ybx1P62960 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Ybx1P62960 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Ybx1P62960 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ybx1P62960 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ybx1P62960 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ybx1P62960 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ybx1P62960 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ybx1P62960 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ybx1P62960 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ybx1P62960 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Ybx1P62960 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ybx1P62960 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ybx1P62960 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ybx1P62960 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ybx1P62960 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ybx1P62960 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ybx1P62960 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ybx1P62960 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ybx1P62960 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ybx1P62960 Mir744-201ENSMUST00000103261 100 ntBASIC10.96□□□□□ -0.65
Ybx1P62960 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ybx1P62960 Gm11544-201ENSMUST00000120215 382 ntBASIC10.96□□□□□ -0.65
Ybx1P62960 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC10.96□□□□□ -0.65
Ybx1P62960 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC10.96□□□□□ -0.65
Ybx1P62960 Gm7833-201ENSMUST00000183288 990 ntBASIC10.96□□□□□ -0.65
Ybx1P62960 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Ybx1P62960 Gm43726-201ENSMUST00000199110 775 ntBASIC10.96□□□□□ -0.65
Ybx1P62960 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC10.96□□□□□ -0.65
Ybx1P62960 Gm45310-201ENSMUST00000210436 275 ntBASIC10.96□□□□□ -0.65
Ybx1P62960 Gm29689-201ENSMUST00000221076 589 ntBASIC10.96□□□□□ -0.65
Ybx1P62960 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC10.96□□□□□ -0.65
Ybx1P62960 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Ybx1P62960 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Ybx1P62960 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ybx1P62960 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Ybx1P62960 Atf7-201ENSMUST00000096143 390 ntBASIC10.96□□□□□ -0.65
Ybx1P62960 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Ybx1P62960 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ybx1P62960 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Ybx1P62960 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ybx1P62960 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ybx1P62960 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ybx1P62960 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ybx1P62960 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ybx1P62960 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ybx1P62960 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ybx1P62960 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Ybx1P62960 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Ybx1P62960 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ybx1P62960 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ybx1P62960 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ybx1P62960 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.95□□□□□ -0.66
Ybx1P62960 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Ybx1P62960 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ybx1P62960 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms