Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Gm29543-201ENSMUST00000188138 967 ntBASIC7.53□□□□□ -1.2
Rpl39P62892 Gm4753-201ENSMUST00000188327 1255 ntBASIC7.53□□□□□ -1.2
Rpl39P62892 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC7.53□□□□□ -1.2
Rpl39P62892 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC7.53□□□□□ -1.2
Rpl39P62892 Gm43852-201ENSMUST00000202098 917 ntBASIC7.53□□□□□ -1.2
Rpl39P62892 Gm44420-201ENSMUST00000203669 490 ntBASIC7.53□□□□□ -1.2
Rpl39P62892 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rpl39P62892 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Rpl39P62892 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC7.53□□□□□ -1.2
Rpl39P62892 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC7.53□□□□□ -1.2
Rpl39P62892 AC154589.2-201ENSMUST00000228847 251 ntBASIC7.53□□□□□ -1.2
Rpl39P62892 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rpl39P62892 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rpl39P62892 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rpl39P62892 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Rpl39P62892 Zfhx3-201ENSMUST00000043896 16433 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rpl39P62892 Dgcr2-204ENSMUST00000117945 4003 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rpl39P62892 Csnk2a1-201ENSMUST00000099224 4206 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rpl39P62892 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rpl39P62892 Gm18198-201ENSMUST00000204986 1551 ntBASIC7.53□□□□□ -1.2
Rpl39P62892 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Rpl39P62892 Rph3a-204ENSMUST00000202406 4096 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rpl39P62892 Tmco4-201ENSMUST00000043042 2922 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rpl39P62892 Kcnmb1-201ENSMUST00000020362 4191 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rpl39P62892 Zfp112-201ENSMUST00000005413 3044 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rpl39P62892 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC7.53□□□□□ -1.2
Rpl39P62892 Pex2-203ENSMUST00000164828 2051 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
Rpl39P62892 Gm7932-202ENSMUST00000205047 2194 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Rpl39P62892 Shcbp1-201ENSMUST00000022945 2156 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rpl39P62892 Adamtsl2-201ENSMUST00000091233 3612 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rpl39P62892 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC7.53□□□□□ -1.2
Rpl39P62892 Zmat2-201ENSMUST00000001419 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rpl39P62892 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rpl39P62892 Gm30132-201ENSMUST00000212816 8757 ntTSL 5 BASIC7.53□□□□□ -1.2
Rpl39P62892 Ido2-201ENSMUST00000121992 2452 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rpl39P62892 Csf2rb2-201ENSMUST00000096356 4612 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Rpl39P62892 Colq-205ENSMUST00000150054 2867 ntTSL 5 BASIC7.53□□□□□ -1.2
Rpl39P62892 Ccdc87-201ENSMUST00000088653 3163 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Rpl39P62892 Dhx35-202ENSMUST00000109478 3284 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Rpl39P62892 Adam22-202ENSMUST00000050166 8969 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.2
Rpl39P62892 Gm9415-201ENSMUST00000200462 1321 ntBASIC7.52□□□□□ -1.2
Rpl39P62892 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Rpl39P62892 Tnc-204ENSMUST00000107377 7100 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.2
Rpl39P62892 Calr4-201ENSMUST00000030285 1606 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Rpl39P62892 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Rpl39P62892 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
Rpl39P62892 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Rpl39P62892 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Rpl39P62892 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Rpl39P62892 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.2
Rpl39P62892 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC7.52□□□□□ -1.2
Rpl39P62892 Gm37806-201ENSMUST00000194524 6387 ntBASIC7.52□□□□□ -1.2
Rpl39P62892 Ssrp1-209ENSMUST00000168266 2721 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Rpl39P62892 Zfp264-202ENSMUST00000208781 2801 ntTSL 5 BASIC7.52□□□□□ -1.21
Rpl39P62892 Ispd-206ENSMUST00000223068 2808 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Rpl39P62892 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Rpl39P62892 Nkiras1-202ENSMUST00000132374 4598 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Rpl39P62892 Fam171a1-202ENSMUST00000072955 3364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Rpl39P62892 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Rpl39P62892 Odf2-205ENSMUST00000113757 3082 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
Rpl39P62892 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Rpl39P62892 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC7.52□□□□□ -1.21
Rpl39P62892 AC165148.1-201ENSMUST00000224795 2372 ntBASIC7.52□□□□□ -1.21
Rpl39P62892 Tex21-202ENSMUST00000218426 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Rpl39P62892 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Rpl39P62892 Gm7103-201ENSMUST00000195642 1852 ntBASIC7.52□□□□□ -1.21
Rpl39P62892 Cd200r2-201ENSMUST00000102805 1750 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Rpl39P62892 Hspd1-ps4-201ENSMUST00000121815 1668 ntBASIC7.52□□□□□ -1.21
Rpl39P62892 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Rpl39P62892 Brcc3-201ENSMUST00000033544 4310 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Rpl39P62892 Utp15-201ENSMUST00000040972 4120 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Rpl39P62892 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC7.52□□□□□ -1.21
Rpl39P62892 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Rpl39P62892 Gm22711-201ENSMUST00000116890 133 ntBASIC7.52□□□□□ -1.21
Rpl39P62892 Gm11956-201ENSMUST00000119525 512 ntBASIC7.52□□□□□ -1.21
Rpl39P62892 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC7.52□□□□□ -1.21
Rpl39P62892 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Rpl39P62892 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC7.52□□□□□ -1.21
Rpl39P62892 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Rpl39P62892 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Rpl39P62892 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.21
Rpl39P62892 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC7.52□□□□□ -1.21
Rpl39P62892 Gm40414-201ENSMUST00000197608 481 ntBASIC7.52□□□□□ -1.21
Rpl39P62892 Gm44323-201ENSMUST00000198689 129 ntBASIC7.52□□□□□ -1.21
Rpl39P62892 Gm7319-201ENSMUST00000210047 778 ntBASIC7.52□□□□□ -1.21
Rpl39P62892 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC7.52□□□□□ -1.21
Rpl39P62892 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC7.52□□□□□ -1.21
Rpl39P62892 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Rpl39P62892 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC7.52□□□□□ -1.21
Rpl39P62892 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC7.52□□□□□ -1.21
Rpl39P62892 AC154276.3-201ENSMUST00000227643 998 ntBASIC7.52□□□□□ -1.21
Rpl39P62892 AC159103.1-201ENSMUST00000228325 429 ntBASIC7.52□□□□□ -1.21
Rpl39P62892 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC7.52□□□□□ -1.21
Rpl39P62892 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC7.52□□□□□ -1.21
Rpl39P62892 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Rpl39P62892 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Rpl39P62892 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Rpl39P62892 Gm23105-201ENSMUST00000083719 134 ntBASIC7.52□□□□□ -1.21
Rpl39P62892 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
Rpl39P62892 Mthfd1-201ENSMUST00000021443 3241 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms