Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Rnf13-201ENSMUST00000041826 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm3P62311 Nrxn1-225ENSMUST00000197268 2280 ntTSL 3 BASIC9.59□□□□□ -0.87
Lsm3P62311 Itgam-203ENSMUST00000106242 4649 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm3P62311 Gm13127-201ENSMUST00000118978 1389 ntBASIC9.59□□□□□ -0.87
Lsm3P62311 AY702103-202ENSMUST00000180996 5876 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm3P62311 Gm37446-201ENSMUST00000193015 4136 ntBASIC9.59□□□□□ -0.87
Lsm3P62311 AC154352.1-201ENSMUST00000221477 2365 ntBASIC9.59□□□□□ -0.87
Lsm3P62311 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC9.59□□□□□ -0.87
Lsm3P62311 Arid5b-204ENSMUST00000219238 7581 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm3P62311 Pik3c3-201ENSMUST00000091978 2998 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm3P62311 Dhdh-201ENSMUST00000011526 5323 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm3P62311 Gm11100-201ENSMUST00000112652 1951 ntTSL 5 BASIC9.59□□□□□ -0.87
Lsm3P62311 Gpatch2l-201ENSMUST00000071106 3829 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm3P62311 Celf2-211ENSMUST00000142941 2338 ntTSL 5 BASIC9.59□□□□□ -0.87
Lsm3P62311 Rnf121-201ENSMUST00000089052 2344 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm3P62311 Zmym5-203ENSMUST00000173954 5357 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm3P62311 Erc2-205ENSMUST00000210135 6233 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Lsm3P62311 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm3P62311 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm3P62311 Ppip5k1-203ENSMUST00000110626 5171 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
Lsm3P62311 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
Lsm3P62311 Marveld2-204ENSMUST00000225754 3111 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Lsm3P62311 Rcbtb2-201ENSMUST00000022702 2971 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
Lsm3P62311 Itgb6-201ENSMUST00000028348 2995 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm3P62311 Sntg1-207ENSMUST00000140295 4887 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm3P62311 Uox-201ENSMUST00000029837 2737 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm3P62311 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm3P62311 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm3P62311 Atg13-201ENSMUST00000028678 3604 ntTSL 5 BASIC9.58□□□□□ -0.88
Lsm3P62311 Homer1-204ENSMUST00000102752 5713 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm3P62311 Slc23a1-201ENSMUST00000025212 3026 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm3P62311 Zfp54-201ENSMUST00000007884 2300 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm3P62311 Gm20658-202ENSMUST00000177059 1950 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm3P62311 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm3P62311 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm3P62311 Gm11956-201ENSMUST00000119525 512 ntBASIC9.58□□□□□ -0.88
Lsm3P62311 Gm11988-201ENSMUST00000122321 1069 ntBASIC9.58□□□□□ -0.88
Lsm3P62311 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC9.58□□□□□ -0.88
Lsm3P62311 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC9.58□□□□□ -0.88
Lsm3P62311 Cd63-ps-202ENSMUST00000154992 717 ntBASIC9.58□□□□□ -0.88
Lsm3P62311 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC9.58□□□□□ -0.88
Lsm3P62311 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC9.58□□□□□ -0.88
Lsm3P62311 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Lsm3P62311 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC9.58□□□□□ -0.88
Lsm3P62311 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm3P62311 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC9.58□□□□□ -0.88
Lsm3P62311 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
Lsm3P62311 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
Lsm3P62311 Gm6108-201ENSMUST00000208365 367 ntBASIC9.58□□□□□ -0.88
Lsm3P62311 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm3P62311 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC9.58□□□□□ -0.88
Lsm3P62311 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC9.58□□□□□ -0.88
Lsm3P62311 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Lsm3P62311 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Lsm3P62311 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC9.58□□□□□ -0.88
Lsm3P62311 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm3P62311 Gm21811-201ENSMUST00000096485 930 ntBASIC9.58□□□□□ -0.88
Lsm3P62311 Gm43135-201ENSMUST00000196442 3462 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm3P62311 Cracr2a-203ENSMUST00000212051 7625 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Lsm3P62311 Tmem108-201ENSMUST00000049452 3574 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm3P62311 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm3P62311 Htr1a-201ENSMUST00000022235 4484 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Lsm3P62311 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm3P62311 Wdr93-201ENSMUST00000035622 2285 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm3P62311 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm3P62311 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Lsm3P62311 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm3P62311 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm3P62311 Zfp58-201ENSMUST00000076123 2391 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm3P62311 Olfr1221-202ENSMUST00000143255 2800 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
Lsm3P62311 Dync1i2-205ENSMUST00000112139 2483 ntAPPRIS ALT1 TSL 5 BASIC9.58□□□□□ -0.88
Lsm3P62311 4833420G17Rik-201ENSMUST00000026519 2565 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm3P62311 Dzank1-201ENSMUST00000081982 6847 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Lsm3P62311 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm3P62311 Dlgap4-202ENSMUST00000070782 3303 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm3P62311 Gm38413-202ENSMUST00000198449 2348 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm3P62311 Nwd1-201ENSMUST00000093427 7840 ntTSL 5 BASIC9.57□□□□□ -0.88
Lsm3P62311 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm3P62311 Zmat3-203ENSMUST00000168566 7672 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm3P62311 Phf21a-208ENSMUST00000111294 3710 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Lsm3P62311 Mcm5-201ENSMUST00000164309 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm3P62311 Kcnh6-201ENSMUST00000001965 3368 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm3P62311 Foxm1-201ENSMUST00000073316 4652 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm3P62311 Papss1-206ENSMUST00000200527 2811 ntTSL 5 BASIC9.57□□□□□ -0.88
Lsm3P62311 Trpm5-201ENSMUST00000009390 4123 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm3P62311 Atp10d-202ENSMUST00000126664 6052 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm3P62311 Tanc1-203ENSMUST00000112568 7422 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Lsm3P62311 Tmem255a-202ENSMUST00000089054 3311 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm3P62311 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm3P62311 Xab2-201ENSMUST00000019614 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm3P62311 Sncaip-201ENSMUST00000025413 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm3P62311 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm3P62311 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Lsm3P62311 Gm15285-201ENSMUST00000119271 473 ntBASIC9.57□□□□□ -0.88
Lsm3P62311 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC9.57□□□□□ -0.88
Lsm3P62311 Bcl9-207ENSMUST00000166341 4652 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Lsm3P62311 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC9.57□□□□□ -0.88
Lsm3P62311 Mir7677-201ENSMUST00000184226 67 ntBASIC9.57□□□□□ -0.88
Lsm3P62311 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Lsm3P62311 CT025533.2-201ENSMUST00000228715 1248 ntBASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms