Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Nsmce2-201ENSMUST00000079703 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox1P53783 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox1P53783 AC134898.1-201ENSMUST00000223738 1836 ntBASIC10.99□□□□□ -0.65
Sox1P53783 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox1P53783 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox1P53783 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox1P53783 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sox1P53783 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.99□□□□□ -0.65
Sox1P53783 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sox1P53783 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox1P53783 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC10.99□□□□□ -0.65
Sox1P53783 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox1P53783 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox1P53783 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox1P53783 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox1P53783 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox1P53783 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Sox1P53783 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Sox1P53783 Bgn-207ENSMUST00000169489 1574 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Sox1P53783 Gm44153-201ENSMUST00000204162 1580 ntBASIC10.99□□□□□ -0.65
Sox1P53783 Gm37058-201ENSMUST00000193393 1644 ntBASIC10.98□□□□□ -0.65
Sox1P53783 AC154640.1-203ENSMUST00000228316 1618 ntBASIC10.98□□□□□ -0.65
Sox1P53783 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox1P53783 Gm19001-201ENSMUST00000222736 1651 ntBASIC10.98□□□□□ -0.65
Sox1P53783 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Sox1P53783 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox1P53783 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox1P53783 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Sox1P53783 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox1P53783 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox1P53783 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox1P53783 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox1P53783 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox1P53783 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Sox1P53783 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.98□□□□□ -0.65
Sox1P53783 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Sox1P53783 Mup-ps29-201ENSMUST00000122281 202 ntBASIC10.98□□□□□ -0.65
Sox1P53783 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox1P53783 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC10.98□□□□□ -0.65
Sox1P53783 Gm9866-201ENSMUST00000177636 486 ntTSL 5 BASIC10.98□□□□□ -0.65
Sox1P53783 D330041H03Rik-202ENSMUST00000180390 411 ntTSL 2 BASIC10.98□□□□□ -0.65
Sox1P53783 Gm26913-201ENSMUST00000182391 732 ntBASIC10.98□□□□□ -0.65
Sox1P53783 Gm4398-201ENSMUST00000182698 992 ntBASIC10.98□□□□□ -0.65
Sox1P53783 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC10.98□□□□□ -0.65
Sox1P53783 Gm27953-201ENSMUST00000185171 143 ntBASIC10.98□□□□□ -0.65
Sox1P53783 Gm28179-201ENSMUST00000188365 613 ntBASIC10.98□□□□□ -0.65
Sox1P53783 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Sox1P53783 Ighv5-10-201ENSMUST00000194591 252 ntBASIC10.98□□□□□ -0.65
Sox1P53783 Acsm5-204ENSMUST00000207387 1130 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox1P53783 Gm42067-202ENSMUST00000210917 410 ntTSL 2 BASIC10.98□□□□□ -0.65
Sox1P53783 Gm32856-202ENSMUST00000212180 1134 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox1P53783 Gm2981-201ENSMUST00000213947 694 ntBASIC10.98□□□□□ -0.65
Sox1P53783 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Sox1P53783 AC124555.1-201ENSMUST00000227051 880 ntBASIC10.98□□□□□ -0.65
Sox1P53783 Yipf7-201ENSMUST00000031045 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox1P53783 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Sox1P53783 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox1P53783 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox1P53783 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox1P53783 Gm31182-201ENSMUST00000219061 2391 ntTSL 5 BASIC10.98□□□□□ -0.65
Sox1P53783 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.98□□□□□ -0.65
Sox1P53783 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.98□□□□□ -0.65
Sox1P53783 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox1P53783 Gm45663-201ENSMUST00000210429 1632 ntBASIC10.98□□□□□ -0.65
Sox1P53783 Ucp1-201ENSMUST00000034146 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox1P53783 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox1P53783 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Sox1P53783 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox1P53783 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox1P53783 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox1P53783 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox1P53783 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox1P53783 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Sox1P53783 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox1P53783 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox1P53783 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox1P53783 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Sox1P53783 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox1P53783 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.97□□□□□ -0.65
Sox1P53783 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox1P53783 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox1P53783 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox1P53783 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox1P53783 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox1P53783 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox1P53783 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox1P53783 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sox1P53783 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox1P53783 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sox1P53783 Olfr281-201ENSMUST00000109163 1058 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Sox1P53783 Gm11771-201ENSMUST00000118124 732 ntBASIC10.97□□□□□ -0.65
Sox1P53783 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC10.97□□□□□ -0.65
Sox1P53783 Gm14913-201ENSMUST00000120011 1093 ntBASIC10.97□□□□□ -0.65
Sox1P53783 Gm24346-201ENSMUST00000158712 194 ntBASIC10.97□□□□□ -0.65
Sox1P53783 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox1P53783 Rps28-205ENSMUST00000173844 382 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sox1P53783 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sox1P53783 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC10.97□□□□□ -0.65
Sox1P53783 Gm8704-201ENSMUST00000197181 435 ntBASIC10.97□□□□□ -0.65
Sox1P53783 Gm43551-201ENSMUST00000197221 440 ntBASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms