Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shmt1P50431 Gm22594-201ENSMUST00000104251 130 ntBASIC11.3□□□□□ -0.6
Shmt1P50431 Gm12397-201ENSMUST00000117674 615 ntBASIC11.3□□□□□ -0.6
Shmt1P50431 Gm1826-201ENSMUST00000118646 1162 ntBASIC11.3□□□□□ -0.6
Shmt1P50431 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC11.3□□□□□ -0.6
Shmt1P50431 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Shmt1P50431 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shmt1P50431 Gm5543-201ENSMUST00000193329 1091 ntBASIC11.3□□□□□ -0.6
Shmt1P50431 Gm37452-201ENSMUST00000194416 1160 ntBASIC11.3□□□□□ -0.6
Shmt1P50431 Gm7319-201ENSMUST00000210047 778 ntBASIC11.3□□□□□ -0.6
Shmt1P50431 Gm45745-201ENSMUST00000211447 1180 ntBASIC11.3□□□□□ -0.6
Shmt1P50431 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC11.3□□□□□ -0.6
Shmt1P50431 AC155300.1-201ENSMUST00000219134 480 ntBASIC11.3□□□□□ -0.6
Shmt1P50431 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC11.3□□□□□ -0.6
Shmt1P50431 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shmt1P50431 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shmt1P50431 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC11.3□□□□□ -0.6
Shmt1P50431 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shmt1P50431 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shmt1P50431 Gm5449-201ENSMUST00000081132 357 ntBASIC11.3□□□□□ -0.6
Shmt1P50431 Gm6478-201ENSMUST00000099450 742 ntBASIC11.3□□□□□ -0.6
Shmt1P50431 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shmt1P50431 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Shmt1P50431 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shmt1P50431 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shmt1P50431 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shmt1P50431 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shmt1P50431 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shmt1P50431 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Shmt1P50431 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Shmt1P50431 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Shmt1P50431 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.3□□□□□ -0.6
Shmt1P50431 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Shmt1P50431 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC11.29□□□□□ -0.6
Shmt1P50431 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Shmt1P50431 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shmt1P50431 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Shmt1P50431 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shmt1P50431 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shmt1P50431 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Shmt1P50431 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shmt1P50431 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC11.29□□□□□ -0.6
Shmt1P50431 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Shmt1P50431 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Shmt1P50431 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shmt1P50431 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Shmt1P50431 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC11.29□□□□□ -0.6
Shmt1P50431 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shmt1P50431 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Shmt1P50431 Gm11411-201ENSMUST00000117951 719 ntBASIC11.29□□□□□ -0.6
Shmt1P50431 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC11.29□□□□□ -0.6
Shmt1P50431 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Shmt1P50431 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC11.29□□□□□ -0.6
Shmt1P50431 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shmt1P50431 Mir6387-201ENSMUST00000184042 108 ntBASIC11.29□□□□□ -0.6
Shmt1P50431 Gm45085-201ENSMUST00000209100 441 ntBASIC11.29□□□□□ -0.6
Shmt1P50431 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC11.29□□□□□ -0.6
Shmt1P50431 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Shmt1P50431 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Shmt1P50431 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shmt1P50431 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Shmt1P50431 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shmt1P50431 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Shmt1P50431 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shmt1P50431 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Shmt1P50431 Gm29101-201ENSMUST00000188329 1471 ntBASIC11.29□□□□□ -0.6
Shmt1P50431 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shmt1P50431 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Shmt1P50431 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shmt1P50431 Gm45719-201ENSMUST00000207954 1662 ntBASIC11.29□□□□□ -0.6
Shmt1P50431 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Shmt1P50431 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Shmt1P50431 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shmt1P50431 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Shmt1P50431 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Shmt1P50431 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shmt1P50431 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Shmt1P50431 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shmt1P50431 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shmt1P50431 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC11.29□□□□□ -0.6
Shmt1P50431 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.29□□□□□ -0.6
Shmt1P50431 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shmt1P50431 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shmt1P50431 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Shmt1P50431 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shmt1P50431 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shmt1P50431 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shmt1P50431 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Shmt1P50431 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shmt1P50431 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shmt1P50431 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shmt1P50431 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shmt1P50431 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shmt1P50431 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC11.28□□□□□ -0.6
Shmt1P50431 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.28□□□□□ -0.6
Shmt1P50431 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shmt1P50431 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.28□□□□□ -0.6
Shmt1P50431 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shmt1P50431 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Shmt1P50431 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms