Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-6P43688 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-6P43688 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Nkx2-6P43688 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC10.14□□□□□ -0.79
Nkx2-6P43688 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-6P43688 Gm5395-201ENSMUST00000121650 915 ntBASIC10.14□□□□□ -0.79
Nkx2-6P43688 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Nkx2-6P43688 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Nkx2-6P43688 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-6P43688 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Nkx2-6P43688 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Nkx2-6P43688 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC10.14□□□□□ -0.79
Nkx2-6P43688 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-6P43688 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC10.14□□□□□ -0.79
Nkx2-6P43688 Gm42859-201ENSMUST00000199572 193 ntBASIC10.14□□□□□ -0.79
Nkx2-6P43688 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.14□□□□□ -0.79
Nkx2-6P43688 Gm9644-201ENSMUST00000212828 1183 ntBASIC10.14□□□□□ -0.79
Nkx2-6P43688 AC129217.1-201ENSMUST00000225181 642 ntBASIC10.14□□□□□ -0.79
Nkx2-6P43688 AC138716.2-201ENSMUST00000226670 1016 ntBASIC10.14□□□□□ -0.79
Nkx2-6P43688 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-6P43688 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-6P43688 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-6P43688 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-6P43688 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-6P43688 Gm45165-201ENSMUST00000207763 1631 ntBASIC10.14□□□□□ -0.79
Nkx2-6P43688 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-6P43688 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Nkx2-6P43688 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-6P43688 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-6P43688 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-6P43688 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-6P43688 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Nkx2-6P43688 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Nkx2-6P43688 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.14□□□□□ -0.79
Nkx2-6P43688 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.13□□□□□ -0.79
Nkx2-6P43688 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-6P43688 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Nkx2-6P43688 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-6P43688 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-6P43688 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC10.13□□□□□ -0.79
Nkx2-6P43688 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
Nkx2-6P43688 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-6P43688 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-6P43688 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-6P43688 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-6P43688 Gm43482-201ENSMUST00000202797 1861 ntBASIC10.13□□□□□ -0.79
Nkx2-6P43688 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-6P43688 Gm5159-201ENSMUST00000212733 1652 ntBASIC10.13□□□□□ -0.79
Nkx2-6P43688 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.13□□□□□ -0.79
Nkx2-6P43688 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-6P43688 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-6P43688 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Nkx2-6P43688 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC10.13□□□□□ -0.79
Nkx2-6P43688 Gm23675-201ENSMUST00000157311 125 ntBASIC10.13□□□□□ -0.79
Nkx2-6P43688 Gm5808-201ENSMUST00000178090 357 ntBASIC10.13□□□□□ -0.79
Nkx2-6P43688 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-6P43688 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-6P43688 Gm44953-201ENSMUST00000208745 1286 ntBASIC10.13□□□□□ -0.79
Nkx2-6P43688 AC116797.2-202ENSMUST00000223587 1017 ntBASIC10.13□□□□□ -0.79
Nkx2-6P43688 AC164883.7-201ENSMUST00000228534 851 ntBASIC10.13□□□□□ -0.79
Nkx2-6P43688 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Nkx2-6P43688 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-6P43688 Gm25514-201ENSMUST00000083860 135 ntBASIC10.13□□□□□ -0.79
Nkx2-6P43688 Atf7-201ENSMUST00000096143 390 ntBASIC10.13□□□□□ -0.79
Nkx2-6P43688 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Nkx2-6P43688 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-6P43688 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Nkx2-6P43688 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-6P43688 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-6P43688 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-6P43688 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-6P43688 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-6P43688 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-6P43688 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-6P43688 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-6P43688 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-6P43688 Gm38312-201ENSMUST00000195426 1746 ntBASIC10.13□□□□□ -0.79
Nkx2-6P43688 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-6P43688 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-6P43688 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-6P43688 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Nkx2-6P43688 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-6P43688 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-6P43688 Gm8752-201ENSMUST00000173427 1694 ntBASIC10.12□□□□□ -0.79
Nkx2-6P43688 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-6P43688 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-6P43688 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-6P43688 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-6P43688 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-6P43688 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Nkx2-6P43688 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-6P43688 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-6P43688 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-6P43688 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-6P43688 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-6P43688 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-6P43688 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC10.12□□□□□ -0.79
Nkx2-6P43688 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-6P43688 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Nkx2-6P43688 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms