Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cd9P40240 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cd9P40240 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cd9P40240 Smok4a-201ENSMUST00000074512 1455 ntBASIC10.53□□□□□ -0.72
Cd9P40240 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cd9P40240 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cd9P40240 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cd9P40240 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cd9P40240 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Cd9P40240 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Cd9P40240 Htr3b-201ENSMUST00000008734 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cd9P40240 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Cd9P40240 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Cd9P40240 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Cd9P40240 AC117648.1-201ENSMUST00000219777 2510 ntBASIC10.52□□□□□ -0.72
Cd9P40240 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cd9P40240 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cd9P40240 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC10.52□□□□□ -0.73
Cd9P40240 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cd9P40240 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cd9P40240 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cd9P40240 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cd9P40240 Gm12397-201ENSMUST00000117674 615 ntBASIC10.52□□□□□ -0.73
Cd9P40240 Gm8482-201ENSMUST00000117972 471 ntBASIC10.52□□□□□ -0.73
Cd9P40240 Gm13841-201ENSMUST00000118829 483 ntBASIC10.52□□□□□ -0.73
Cd9P40240 Gm11449-201ENSMUST00000119175 476 ntBASIC10.52□□□□□ -0.73
Cd9P40240 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Cd9P40240 Gm12208-201ENSMUST00000122004 163 ntBASIC10.52□□□□□ -0.73
Cd9P40240 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC10.52□□□□□ -0.73
Cd9P40240 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC10.52□□□□□ -0.73
Cd9P40240 Gm23153-201ENSMUST00000175323 313 ntBASIC10.52□□□□□ -0.73
Cd9P40240 Gm8210-201ENSMUST00000178557 483 ntBASIC10.52□□□□□ -0.73
Cd9P40240 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cd9P40240 Gm15454-201ENSMUST00000179718 483 ntBASIC10.52□□□□□ -0.73
Cd9P40240 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cd9P40240 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cd9P40240 Gm19587-201ENSMUST00000191395 545 ntBASIC10.52□□□□□ -0.73
Cd9P40240 Gm9116-201ENSMUST00000192400 1018 ntBASIC10.52□□□□□ -0.73
Cd9P40240 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC10.52□□□□□ -0.73
Cd9P40240 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cd9P40240 Gm9487-201ENSMUST00000216600 472 ntBASIC10.52□□□□□ -0.73
Cd9P40240 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cd9P40240 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cd9P40240 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cd9P40240 Gm6344-201ENSMUST00000075962 483 ntBASIC10.52□□□□□ -0.73
Cd9P40240 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC10.52□□□□□ -0.73
Cd9P40240 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC10.52□□□□□ -0.73
Cd9P40240 Gm11470-201ENSMUST00000118868 1475 ntBASIC10.52□□□□□ -0.73
Cd9P40240 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cd9P40240 Duxbl1-201ENSMUST00000049793 2266 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cd9P40240 H2-Ob-201ENSMUST00000095342 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cd9P40240 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Cd9P40240 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cd9P40240 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.52□□□□□ -0.73
Cd9P40240 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cd9P40240 H2-T3-204ENSMUST00000102675 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cd9P40240 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cd9P40240 Gm5703-201ENSMUST00000186658 3973 ntBASIC10.52□□□□□ -0.73
Cd9P40240 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.52□□□□□ -0.73
Cd9P40240 Apobec3-204ENSMUST00000175714 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cd9P40240 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cd9P40240 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cd9P40240 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cd9P40240 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cd9P40240 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Cd9P40240 Gm37583-201ENSMUST00000195460 2487 ntBASIC10.51□□□□□ -0.73
Cd9P40240 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Cd9P40240 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Cd9P40240 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cd9P40240 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cd9P40240 Il18bp-202ENSMUST00000209368 2596 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cd9P40240 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cd9P40240 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cd9P40240 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cd9P40240 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Cd9P40240 AC154575.1-201ENSMUST00000227166 1474 ntBASIC10.51□□□□□ -0.73
Cd9P40240 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cd9P40240 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Cd9P40240 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cd9P40240 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC10.51□□□□□ -0.73
Cd9P40240 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Cd9P40240 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Cd9P40240 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cd9P40240 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cd9P40240 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cd9P40240 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC10.51□□□□□ -0.73
Cd9P40240 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC10.51□□□□□ -0.73
Cd9P40240 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC10.51□□□□□ -0.73
Cd9P40240 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cd9P40240 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cd9P40240 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC10.51□□□□□ -0.73
Cd9P40240 Rn7s6-201ENSMUST00000175005 291 ntBASIC10.51□□□□□ -0.73
Cd9P40240 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cd9P40240 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC10.51□□□□□ -0.73
Cd9P40240 Gm7583-201ENSMUST00000182941 1005 ntBASIC10.51□□□□□ -0.73
Cd9P40240 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC10.51□□□□□ -0.73
Cd9P40240 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC10.51□□□□□ -0.73
Cd9P40240 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Cd9P40240 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC10.51□□□□□ -0.73
Cd9P40240 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms