Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 5430430B14Rik-201ENSMUST00000209427 1630 ntBASIC9.72□□□□□ -0.85
Nedd8P29595 Gm10754-202ENSMUST00000220233 1633 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Nedd8P29595 Spry4-201ENSMUST00000025295 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nedd8P29595 Zfp532-208ENSMUST00000182852 5476 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Nedd8P29595 Lrrcc1-202ENSMUST00000108370 3359 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nedd8P29595 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Nedd8P29595 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nedd8P29595 Gm11824-201ENSMUST00000120191 846 ntBASIC9.72□□□□□ -0.85
Nedd8P29595 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC9.72□□□□□ -0.85
Nedd8P29595 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Nedd8P29595 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nedd8P29595 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC9.72□□□□□ -0.85
Nedd8P29595 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC9.72□□□□□ -0.85
Nedd8P29595 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Nedd8P29595 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
Nedd8P29595 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Nedd8P29595 Gm27514-201ENSMUST00000183692 110 ntBASIC9.72□□□□□ -0.85
Nedd8P29595 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC9.72□□□□□ -0.85
Nedd8P29595 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Nedd8P29595 Gm38341-201ENSMUST00000195357 515 ntBASIC9.72□□□□□ -0.85
Nedd8P29595 Gm45224-201ENSMUST00000208203 414 ntBASIC9.72□□□□□ -0.85
Nedd8P29595 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Nedd8P29595 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Nedd8P29595 Gm7594-201ENSMUST00000218595 871 ntBASIC9.72□□□□□ -0.85
Nedd8P29595 AC132384.14-201ENSMUST00000219346 1147 ntBASIC9.72□□□□□ -0.85
Nedd8P29595 Gm18042-201ENSMUST00000219887 790 ntBASIC9.72□□□□□ -0.85
Nedd8P29595 Nolc1-209ENSMUST00000225780 2978 ntAPPRIS ALT2 BASIC9.72□□□□□ -0.85
Nedd8P29595 Itgb6-201ENSMUST00000028348 2995 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nedd8P29595 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Nedd8P29595 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nedd8P29595 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nedd8P29595 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Nedd8P29595 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Nedd8P29595 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nedd8P29595 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Nedd8P29595 Pwp1-201ENSMUST00000001836 2572 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nedd8P29595 Gm5739-201ENSMUST00000208601 1703 ntBASIC9.72□□□□□ -0.85
Nedd8P29595 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Nedd8P29595 Rbbp4-201ENSMUST00000102598 4407 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nedd8P29595 Rbm19-201ENSMUST00000031590 4010 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nedd8P29595 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Nedd8P29595 4932702P03Rik-202ENSMUST00000151220 2792 ntTSL 2 BASIC9.72□□□□□ -0.85
Nedd8P29595 Gm13104-201ENSMUST00000119651 1446 ntBASIC9.72□□□□□ -0.85
Nedd8P29595 Prkag2-201ENSMUST00000030784 3331 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Nedd8P29595 Ctage5-220ENSMUST00000177225 2872 ntTSL 5 BASIC9.72□□□□□ -0.85
Nedd8P29595 Ube2l3-202ENSMUST00000115699 2906 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Nedd8P29595 Ccdc136-209ENSMUST00000181464 3444 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nedd8P29595 Gm15604-201ENSMUST00000118350 1456 ntBASIC9.72□□□□□ -0.85
Nedd8P29595 Gm5592-201ENSMUST00000097044 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Nedd8P29595 Ppip5k1-203ENSMUST00000110626 5171 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.85
Nedd8P29595 Tmem74bos-202ENSMUST00000149319 2090 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Nedd8P29595 Trip12-207ENSMUST00000186648 6442 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Nedd8P29595 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Nedd8P29595 Rorb-202ENSMUST00000112828 2854 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Nedd8P29595 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC9.71□□□□□ -0.85
Nedd8P29595 Atp4a-201ENSMUST00000005692 3485 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Nedd8P29595 Lrat-201ENSMUST00000029632 5351 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nedd8P29595 Slc23a1-201ENSMUST00000025212 3026 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Nedd8P29595 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Nedd8P29595 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC9.71□□□□□ -0.86
Nedd8P29595 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nedd8P29595 Ins2-202ENSMUST00000105930 583 ntTSL 3 BASIC9.71□□□□□ -0.86
Nedd8P29595 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Nedd8P29595 Gm11793-201ENSMUST00000120433 981 ntBASIC9.71□□□□□ -0.86
Nedd8P29595 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nedd8P29595 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC9.71□□□□□ -0.86
Nedd8P29595 Cd63-ps-202ENSMUST00000154992 717 ntBASIC9.71□□□□□ -0.86
Nedd8P29595 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nedd8P29595 Gm7696-201ENSMUST00000174727 907 ntBASIC9.71□□□□□ -0.86
Nedd8P29595 Gm27530-201ENSMUST00000184096 98 ntBASIC9.71□□□□□ -0.86
Nedd8P29595 Gm45784-201ENSMUST00000188360 142 ntBASIC9.71□□□□□ -0.86
Nedd8P29595 Gm3332-201ENSMUST00000189337 928 ntBASIC9.71□□□□□ -0.86
Nedd8P29595 Gm7319-201ENSMUST00000210047 778 ntBASIC9.71□□□□□ -0.86
Nedd8P29595 AI463170-201ENSMUST00000217839 970 ntBASIC9.71□□□□□ -0.86
Nedd8P29595 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC9.71□□□□□ -0.86
Nedd8P29595 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nedd8P29595 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nedd8P29595 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Nedd8P29595 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Nedd8P29595 Gm12709-201ENSMUST00000149348 1912 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Nedd8P29595 Eno4-202ENSMUST00000200910 2567 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.86
Nedd8P29595 Eno4-201ENSMUST00000054280 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nedd8P29595 Tmem255a-202ENSMUST00000089054 3311 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Nedd8P29595 Fmo3-201ENSMUST00000028010 2046 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nedd8P29595 Itgb8-201ENSMUST00000026360 8403 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nedd8P29595 AY702103-202ENSMUST00000180996 5876 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Nedd8P29595 4930451G09Rik-201ENSMUST00000090457 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nedd8P29595 Rnft1-201ENSMUST00000020827 4452 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nedd8P29595 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Nedd8P29595 Xdh-201ENSMUST00000024866 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nedd8P29595 Ash2l-203ENSMUST00000110609 2300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nedd8P29595 Rbm27-202ENSMUST00000091920 6266 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nedd8P29595 Olfr569-202ENSMUST00000217024 4741 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Nedd8P29595 Dlgap4-202ENSMUST00000070782 3303 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nedd8P29595 Osbpl3-201ENSMUST00000071728 3307 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nedd8P29595 Ctc1-201ENSMUST00000021278 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nedd8P29595 Dync1i1-201ENSMUST00000115554 2518 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nedd8P29595 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Nedd8P29595 Tmem108-201ENSMUST00000049452 3574 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Nedd8P29595 Ift172-201ENSMUST00000041565 5403 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms