Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hoxd8P23463 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Hoxd8P23463 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Hoxd8P23463 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Hoxd8P23463 Gm37697-201ENSMUST00000195680 1844 ntBASIC11.19□□□□□ -0.62
Hoxd8P23463 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxd8P23463 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxd8P23463 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxd8P23463 AC166361.2-201ENSMUST00000219269 1415 ntBASIC11.18□□□□□ -0.62
Hoxd8P23463 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxd8P23463 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Hoxd8P23463 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxd8P23463 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxd8P23463 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxd8P23463 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxd8P23463 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Hoxd8P23463 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxd8P23463 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxd8P23463 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.18□□□□□ -0.62
Hoxd8P23463 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxd8P23463 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxd8P23463 Gm23604-201ENSMUST00000104311 132 ntBASIC11.18□□□□□ -0.62
Hoxd8P23463 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxd8P23463 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxd8P23463 Defa-ps16-201ENSMUST00000121939 171 ntBASIC11.18□□□□□ -0.62
Hoxd8P23463 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC11.18□□□□□ -0.62
Hoxd8P23463 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxd8P23463 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC11.18□□□□□ -0.62
Hoxd8P23463 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxd8P23463 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC11.18□□□□□ -0.62
Hoxd8P23463 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Hoxd8P23463 Gm20821-201ENSMUST00000179829 1153 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Hoxd8P23463 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Hoxd8P23463 Gm3650-201ENSMUST00000180600 747 ntBASIC11.18□□□□□ -0.62
Hoxd8P23463 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Hoxd8P23463 Gm8918-201ENSMUST00000190587 1087 ntBASIC11.18□□□□□ -0.62
Hoxd8P23463 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC11.18□□□□□ -0.62
Hoxd8P23463 Gm4430-202ENSMUST00000193902 1041 ntBASIC11.18□□□□□ -0.62
Hoxd8P23463 Gm8625-201ENSMUST00000194185 1077 ntBASIC11.18□□□□□ -0.62
Hoxd8P23463 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC11.18□□□□□ -0.62
Hoxd8P23463 Gm42617-201ENSMUST00000197640 1229 ntBASIC11.18□□□□□ -0.62
Hoxd8P23463 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxd8P23463 Gm5311-201ENSMUST00000203518 709 ntBASIC11.18□□□□□ -0.62
Hoxd8P23463 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC11.18□□□□□ -0.62
Hoxd8P23463 Gm44237-201ENSMUST00000205183 936 ntBASIC11.18□□□□□ -0.62
Hoxd8P23463 Gm5738-201ENSMUST00000206016 779 ntBASIC11.18□□□□□ -0.62
Hoxd8P23463 AC133598.4-201ENSMUST00000224577 454 ntBASIC11.18□□□□□ -0.62
Hoxd8P23463 AC242269.1-201ENSMUST00000227020 741 ntBASIC11.18□□□□□ -0.62
Hoxd8P23463 AC107711.4-201ENSMUST00000228948 440 ntBASIC11.18□□□□□ -0.62
Hoxd8P23463 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxd8P23463 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Hoxd8P23463 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC11.18□□□□□ -0.62
Hoxd8P23463 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Hoxd8P23463 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxd8P23463 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Hoxd8P23463 Gm45210-201ENSMUST00000206401 1577 ntBASIC11.18□□□□□ -0.62
Hoxd8P23463 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC11.18□□□□□ -0.62
Hoxd8P23463 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC11.18□□□□□ -0.62
Hoxd8P23463 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxd8P23463 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxd8P23463 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Hoxd8P23463 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxd8P23463 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxd8P23463 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC11.18□□□□□ -0.62
Hoxd8P23463 Gm29101-201ENSMUST00000188329 1471 ntBASIC11.18□□□□□ -0.62
Hoxd8P23463 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxd8P23463 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxd8P23463 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.18□□□□□ -0.62
Hoxd8P23463 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxd8P23463 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Hoxd8P23463 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxd8P23463 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Hoxd8P23463 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxd8P23463 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxd8P23463 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hoxd8P23463 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxd8P23463 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxd8P23463 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.17□□□□□ -0.62
Hoxd8P23463 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxd8P23463 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxd8P23463 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxd8P23463 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxd8P23463 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Hoxd8P23463 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxd8P23463 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.17□□□□□ -0.62
Hoxd8P23463 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC11.17□□□□□ -0.62
Hoxd8P23463 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxd8P23463 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxd8P23463 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxd8P23463 Gm38034-201ENSMUST00000193915 2069 ntBASIC11.17□□□□□ -0.62
Hoxd8P23463 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxd8P23463 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxd8P23463 Gm13192-201ENSMUST00000101199 208 ntBASIC11.17□□□□□ -0.62
Hoxd8P23463 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxd8P23463 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxd8P23463 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxd8P23463 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hoxd8P23463 Gm11235-201ENSMUST00000117763 333 ntBASIC11.17□□□□□ -0.62
Hoxd8P23463 Gm10443-201ENSMUST00000119024 210 ntBASIC11.17□□□□□ -0.62
Hoxd8P23463 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms