Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 AC123062.1-201ENSMUST00000221287 481 ntBASIC8.71□□□□□ -1.02
Hoxd3P09027 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC8.71□□□□□ -1.02
Hoxd3P09027 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC8.71□□□□□ -1.02
Hoxd3P09027 AC122346.3-201ENSMUST00000223983 306 ntBASIC8.71□□□□□ -1.02
Hoxd3P09027 CT025579.2-201ENSMUST00000225280 816 ntBASIC8.71□□□□□ -1.02
Hoxd3P09027 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hoxd3P09027 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Hoxd3P09027 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Hoxd3P09027 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hoxd3P09027 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Hoxd3P09027 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC8.71□□□□□ -1.02
Hoxd3P09027 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Hoxd3P09027 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Hoxd3P09027 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hoxd3P09027 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hoxd3P09027 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Hoxd3P09027 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC8.71□□□□□ -1.02
Hoxd3P09027 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hoxd3P09027 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hoxd3P09027 Gm44573-201ENSMUST00000191753 2370 ntBASIC8.71□□□□□ -1.02
Hoxd3P09027 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hoxd3P09027 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC8.71□□□□□ -1.02
Hoxd3P09027 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hoxd3P09027 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hoxd3P09027 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hoxd3P09027 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hoxd3P09027 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC8.71□□□□□ -1.02
Hoxd3P09027 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hoxd3P09027 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hoxd3P09027 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Hoxd3P09027 Gm10686-201ENSMUST00000215389 3247 ntBASIC8.71□□□□□ -1.02
Hoxd3P09027 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
Hoxd3P09027 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hoxd3P09027 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hoxd3P09027 Mrps14-203ENSMUST00000135680 2999 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hoxd3P09027 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hoxd3P09027 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hoxd3P09027 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Hoxd3P09027 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hoxd3P09027 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hoxd3P09027 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Hoxd3P09027 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
Hoxd3P09027 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hoxd3P09027 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Hoxd3P09027 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Hoxd3P09027 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hoxd3P09027 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC8.7□□□□□ -1.02
Hoxd3P09027 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
Hoxd3P09027 Gm14807-201ENSMUST00000116640 983 ntBASIC8.7□□□□□ -1.02
Hoxd3P09027 Gm12218-201ENSMUST00000117666 399 ntBASIC8.7□□□□□ -1.02
Hoxd3P09027 Gm14270-201ENSMUST00000118388 846 ntBASIC8.7□□□□□ -1.02
Hoxd3P09027 Gm11850-201ENSMUST00000119679 479 ntBASIC8.7□□□□□ -1.02
Hoxd3P09027 Gm15197-201ENSMUST00000120526 478 ntBASIC8.7□□□□□ -1.02
Hoxd3P09027 Gm12030-201ENSMUST00000121917 223 ntBASIC8.7□□□□□ -1.02
Hoxd3P09027 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC8.7□□□□□ -1.02
Hoxd3P09027 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Hoxd3P09027 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC8.7□□□□□ -1.02
Hoxd3P09027 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC8.7□□□□□ -1.02
Hoxd3P09027 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Hoxd3P09027 Gm22552-201ENSMUST00000157796 337 ntBASIC8.7□□□□□ -1.02
Hoxd3P09027 Gm26401-201ENSMUST00000158502 76 ntBASIC8.7□□□□□ -1.02
Hoxd3P09027 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Hoxd3P09027 Gm17219-201ENSMUST00000168439 593 ntBASIC8.7□□□□□ -1.02
Hoxd3P09027 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC8.7□□□□□ -1.02
Hoxd3P09027 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Hoxd3P09027 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Hoxd3P09027 Gm4895-201ENSMUST00000181646 1137 ntBASIC8.7□□□□□ -1.02
Hoxd3P09027 Gm19015-201ENSMUST00000184002 1189 ntBASIC8.7□□□□□ -1.02
Hoxd3P09027 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC8.7□□□□□ -1.02
Hoxd3P09027 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC8.7□□□□□ -1.02
Hoxd3P09027 Gm20281-201ENSMUST00000188225 267 ntBASIC8.7□□□□□ -1.02
Hoxd3P09027 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC8.7□□□□□ -1.02
Hoxd3P09027 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC8.7□□□□□ -1.02
Hoxd3P09027 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC8.7□□□□□ -1.02
Hoxd3P09027 Gm42796-201ENSMUST00000199913 1087 ntBASIC8.7□□□□□ -1.02
Hoxd3P09027 Gm3793-201ENSMUST00000204973 672 ntBASIC8.7□□□□□ -1.02
Hoxd3P09027 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Hoxd3P09027 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC8.7□□□□□ -1.02
Hoxd3P09027 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC8.7□□□□□ -1.02
Hoxd3P09027 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC8.7□□□□□ -1.02
Hoxd3P09027 Gm30671-201ENSMUST00000214898 318 ntBASIC8.7□□□□□ -1.02
Hoxd3P09027 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Hoxd3P09027 CU024892.1-201ENSMUST00000224869 515 ntBASIC8.7□□□□□ -1.02
Hoxd3P09027 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hoxd3P09027 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Hoxd3P09027 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC8.7□□□□□ -1.02
Hoxd3P09027 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hoxd3P09027 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
Hoxd3P09027 Olfr1115-201ENSMUST00000081986 1102 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Hoxd3P09027 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Hoxd3P09027 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Hoxd3P09027 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Hoxd3P09027 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Hoxd3P09027 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Hoxd3P09027 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hoxd3P09027 Gm45416-201ENSMUST00000209713 2201 ntBASIC8.7□□□□□ -1.02
Hoxd3P09027 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hoxd3P09027 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Hoxd3P09027 Gm17213-201ENSMUST00000165161 1360 ntBASIC8.7□□□□□ -1.02
Hoxd3P09027 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC8.7□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms