Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 AC165092.1-201ENSMUST00000224018 486 ntBASIC12.93□□□□□ -0.34
NpcdF8VQB8 AC192333.3-201ENSMUST00000224041 463 ntBASIC12.93□□□□□ -0.34
NpcdF8VQB8 BX649293.1-201ENSMUST00000227437 631 ntBASIC12.93□□□□□ -0.34
NpcdF8VQB8 AC154806.7-201ENSMUST00000227998 202 ntBASIC12.93□□□□□ -0.34
NpcdF8VQB8 Fxyd1-201ENSMUST00000039909 620 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
NpcdF8VQB8 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
NpcdF8VQB8 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NpcdF8VQB8 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Rdh7-201ENSMUST00000047199 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NpcdF8VQB8 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NpcdF8VQB8 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NpcdF8VQB8 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NpcdF8VQB8 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NpcdF8VQB8 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NpcdF8VQB8 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
NpcdF8VQB8 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NpcdF8VQB8 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
NpcdF8VQB8 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NpcdF8VQB8 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NpcdF8VQB8 Mrps33-202ENSMUST00000114797 500 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NpcdF8VQB8 Gm15727-201ENSMUST00000122416 437 ntBASIC12.92□□□□□ -0.34
NpcdF8VQB8 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NpcdF8VQB8 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NpcdF8VQB8 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NpcdF8VQB8 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NpcdF8VQB8 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
NpcdF8VQB8 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
NpcdF8VQB8 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NpcdF8VQB8 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC12.92□□□□□ -0.34
NpcdF8VQB8 9230114K14Rik-202ENSMUST00000198720 837 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NpcdF8VQB8 2010008C14Rik-201ENSMUST00000203956 593 ntBASIC12.92□□□□□ -0.34
NpcdF8VQB8 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
NpcdF8VQB8 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NpcdF8VQB8 AC132446.1-201ENSMUST00000222655 226 ntBASIC12.92□□□□□ -0.34
NpcdF8VQB8 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
NpcdF8VQB8 AC123061.1-201ENSMUST00000228021 999 ntBASIC12.92□□□□□ -0.34
NpcdF8VQB8 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NpcdF8VQB8 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NpcdF8VQB8 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NpcdF8VQB8 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NpcdF8VQB8 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NpcdF8VQB8 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NpcdF8VQB8 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NpcdF8VQB8 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NpcdF8VQB8 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
NpcdF8VQB8 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
NpcdF8VQB8 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NpcdF8VQB8 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
NpcdF8VQB8 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.92□□□□□ -0.34
NpcdF8VQB8 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NpcdF8VQB8 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
NpcdF8VQB8 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NpcdF8VQB8 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NpcdF8VQB8 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NpcdF8VQB8 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NpcdF8VQB8 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NpcdF8VQB8 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.91□□□□□ -0.34
NpcdF8VQB8 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NpcdF8VQB8 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NpcdF8VQB8 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NpcdF8VQB8 Gm45110-201ENSMUST00000205704 1402 ntBASIC12.91□□□□□ -0.34
NpcdF8VQB8 Gm16439-201ENSMUST00000100687 564 ntBASIC12.91□□□□□ -0.34
NpcdF8VQB8 Gm15720-201ENSMUST00000117133 282 ntBASIC12.91□□□□□ -0.34
NpcdF8VQB8 Gm8864-201ENSMUST00000118653 1010 ntBASIC12.91□□□□□ -0.34
NpcdF8VQB8 n-R5s154-201ENSMUST00000122513 108 ntBASIC12.91□□□□□ -0.34
NpcdF8VQB8 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC12.91□□□□□ -0.34
NpcdF8VQB8 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC12.91□□□□□ -0.34
NpcdF8VQB8 D330041H03Rik-202ENSMUST00000180390 411 ntTSL 2 BASIC12.91□□□□□ -0.34
NpcdF8VQB8 Gm26532-201ENSMUST00000180630 690 ntBASIC12.91□□□□□ -0.34
NpcdF8VQB8 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NpcdF8VQB8 Gm18299-201ENSMUST00000192026 636 ntBASIC12.91□□□□□ -0.34
NpcdF8VQB8 Gm7430-201ENSMUST00000193824 1144 ntBASIC12.91□□□□□ -0.34
NpcdF8VQB8 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC12.91□□□□□ -0.34
NpcdF8VQB8 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NpcdF8VQB8 Gm29328-212ENSMUST00000209182 1168 ntTSL 5 BASIC12.91□□□□□ -0.34
NpcdF8VQB8 Gm7727-201ENSMUST00000219830 671 ntBASIC12.91□□□□□ -0.34
NpcdF8VQB8 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
NpcdF8VQB8 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
NpcdF8VQB8 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
NpcdF8VQB8 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC12.91□□□□□ -0.34
NpcdF8VQB8 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
NpcdF8VQB8 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms