Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 Pdzd7-202ENSMUST00000145391 4088 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 Acer2-202ENSMUST00000084433 4060 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 Ints6l-201ENSMUST00000039374 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 Trim34a-201ENSMUST00000060315 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp4cQ9D7F7 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Ralgapb-202ENSMUST00000109485 6709 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Snord23-201ENSMUST00000116828 109 ntBASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Gm11380-201ENSMUST00000118067 560 ntBASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Gm25226-201ENSMUST00000158198 123 ntBASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Gm26461-201ENSMUST00000175064 290 ntBASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Gm19459-201ENSMUST00000176240 835 ntBASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Gm7467-201ENSMUST00000185173 652 ntBASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Gm37301-201ENSMUST00000195412 568 ntBASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Gm9463-201ENSMUST00000206707 601 ntBASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Gm39288-201ENSMUST00000210554 446 ntBASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 AC154436.1-201ENSMUST00000227272 782 ntBASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Wnt5a-202ENSMUST00000112272 3650 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp4cQ9D7F7 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 AC115891.3-201ENSMUST00000219161 2472 ntBASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Gm43636-201ENSMUST00000201501 2235 ntBASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Gm28624-201ENSMUST00000186430 2131 ntBASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Tmem131l-203ENSMUST00000192095 4774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Exoc7-203ENSMUST00000106413 3298 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Gm1848-201ENSMUST00000120711 789 ntBASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Gm28388-201ENSMUST00000186262 437 ntBASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Gm18827-201ENSMUST00000188341 790 ntBASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Gm2875-201ENSMUST00000211333 360 ntBASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Gm37697-201ENSMUST00000195680 1844 ntBASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Tnfrsf8-201ENSMUST00000030339 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp4cQ9D7F7 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms