Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RtcbQ99LF4 Prl8a1-202ENSMUST00000095926 1682 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
RtcbQ99LF4 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
RtcbQ99LF4 Gm6768-201ENSMUST00000022467 1878 ntBASIC13.21□□□□□ -0.3
RtcbQ99LF4 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RtcbQ99LF4 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RtcbQ99LF4 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.2□□□□□ -0.3
RtcbQ99LF4 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RtcbQ99LF4 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RtcbQ99LF4 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC13.2□□□□□ -0.3
RtcbQ99LF4 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RtcbQ99LF4 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RtcbQ99LF4 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RtcbQ99LF4 Rnf216-209ENSMUST00000200607 3704 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RtcbQ99LF4 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RtcbQ99LF4 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RtcbQ99LF4 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RtcbQ99LF4 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
RtcbQ99LF4 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RtcbQ99LF4 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RtcbQ99LF4 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RtcbQ99LF4 Defb48-201ENSMUST00000100493 445 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RtcbQ99LF4 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
RtcbQ99LF4 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RtcbQ99LF4 Ppp1r2-ps4-201ENSMUST00000112182 633 ntBASIC13.2□□□□□ -0.3
RtcbQ99LF4 Gm13898-201ENSMUST00000141865 610 ntBASIC13.2□□□□□ -0.3
RtcbQ99LF4 Gm13778-202ENSMUST00000146633 537 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RtcbQ99LF4 D430040D24Rik-201ENSMUST00000149224 910 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RtcbQ99LF4 Optc-204ENSMUST00000149380 1180 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RtcbQ99LF4 1700026D11Rik-205ENSMUST00000151417 789 ntTSL 3 BASIC13.2□□□□□ -0.3
RtcbQ99LF4 Gm26021-201ENSMUST00000158664 131 ntBASIC13.2□□□□□ -0.3
RtcbQ99LF4 1700028K03Rik-202ENSMUST00000159902 742 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
RtcbQ99LF4 Gm28809-201ENSMUST00000187542 782 ntTSL 5 BASIC13.2□□□□□ -0.3
RtcbQ99LF4 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC13.2□□□□□ -0.3
RtcbQ99LF4 Gm5845-201ENSMUST00000195812 796 ntBASIC13.2□□□□□ -0.3
RtcbQ99LF4 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RtcbQ99LF4 AC124581.2-201ENSMUST00000225459 282 ntBASIC13.2□□□□□ -0.3
RtcbQ99LF4 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RtcbQ99LF4 AC122291.1-201ENSMUST00000228937 5748 ntBASIC13.2□□□□□ -0.3
RtcbQ99LF4 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RtcbQ99LF4 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC13.2□□□□□ -0.3
RtcbQ99LF4 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RtcbQ99LF4 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RtcbQ99LF4 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RtcbQ99LF4 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RtcbQ99LF4 Gm19178-201ENSMUST00000217524 1819 ntBASIC13.2□□□□□ -0.3
RtcbQ99LF4 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RtcbQ99LF4 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RtcbQ99LF4 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
RtcbQ99LF4 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RtcbQ99LF4 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RtcbQ99LF4 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
RtcbQ99LF4 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RtcbQ99LF4 Gm43984-201ENSMUST00000204572 2864 ntBASIC13.19□□□□□ -0.3
RtcbQ99LF4 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RtcbQ99LF4 Gm38376-201ENSMUST00000195493 2253 ntBASIC13.19□□□□□ -0.3
RtcbQ99LF4 Gm45206-201ENSMUST00000206885 2285 ntBASIC13.19□□□□□ -0.3
RtcbQ99LF4 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RtcbQ99LF4 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
RtcbQ99LF4 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RtcbQ99LF4 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RtcbQ99LF4 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RtcbQ99LF4 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RtcbQ99LF4 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RtcbQ99LF4 Use1-203ENSMUST00000110054 973 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
RtcbQ99LF4 Gm8809-201ENSMUST00000119367 743 ntBASIC13.19□□□□□ -0.3
RtcbQ99LF4 Gm16013-201ENSMUST00000152249 353 ntTSL 3 BASIC13.19□□□□□ -0.3
RtcbQ99LF4 Gm23521-201ENSMUST00000177845 110 ntBASIC13.19□□□□□ -0.3
RtcbQ99LF4 Mir6934-201ENSMUST00000183965 62 ntBASIC13.19□□□□□ -0.3
RtcbQ99LF4 Pou1f1-205ENSMUST00000184525 1020 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RtcbQ99LF4 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
RtcbQ99LF4 Gm44460-201ENSMUST00000196179 129 ntBASIC13.19□□□□□ -0.3
RtcbQ99LF4 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC13.19□□□□□ -0.3
RtcbQ99LF4 Gm32098-201ENSMUST00000211305 479 ntTSL 5 BASIC13.19□□□□□ -0.3
RtcbQ99LF4 Gm31374-201ENSMUST00000213885 619 ntTSL 5 BASIC13.19□□□□□ -0.3
RtcbQ99LF4 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC13.19□□□□□ -0.3
RtcbQ99LF4 AC161877.1-201ENSMUST00000227736 699 ntBASIC13.19□□□□□ -0.3
RtcbQ99LF4 Cxcl3-201ENSMUST00000031326 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RtcbQ99LF4 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
RtcbQ99LF4 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RtcbQ99LF4 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RtcbQ99LF4 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RtcbQ99LF4 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC13.19□□□□□ -0.3
RtcbQ99LF4 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RtcbQ99LF4 Gm44664-201ENSMUST00000206841 1786 ntBASIC13.19□□□□□ -0.3
RtcbQ99LF4 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
RtcbQ99LF4 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RtcbQ99LF4 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RtcbQ99LF4 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
RtcbQ99LF4 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RtcbQ99LF4 CN725425-201ENSMUST00000109284 1929 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
RtcbQ99LF4 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RtcbQ99LF4 Oprk1-201ENSMUST00000027038 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RtcbQ99LF4 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RtcbQ99LF4 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RtcbQ99LF4 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
RtcbQ99LF4 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RtcbQ99LF4 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
RtcbQ99LF4 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC13.18□□□□□ -0.3
RtcbQ99LF4 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms