Protein–RNA interactions for Protein: Q8R2N0

Ccdc59, Thyroid transcription factor 1-associated protein 26, mousemouse

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc59Q8R2N0 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Wdr62-201ENSMUST00000108190 4742 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Vma21-201ENSMUST00000114575 4290 ntTSL 2 BASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Ntrk3-206ENSMUST00000195262 2774 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Gm11667-201ENSMUST00000119828 486 ntBASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Gm15725-201ENSMUST00000119947 1090 ntBASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Gm42859-201ENSMUST00000199572 193 ntBASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Gm44551-201ENSMUST00000208804 171 ntBASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Sec22c-201ENSMUST00000078547 5713 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 5430434F05Rik-201ENSMUST00000206080 3553 ntBASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Zfp352-202ENSMUST00000107129 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Cd160-203ENSMUST00000165991 2458 ntAPPRIS ALT2 TSL 3 BASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Gm4884-201ENSMUST00000164422 2852 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Olfr1219-203ENSMUST00000214442 3694 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 CT025639.2-202ENSMUST00000225298 1630 ntBASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Scml4-201ENSMUST00000063063 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Gm13437-201ENSMUST00000122434 1981 ntBASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Olfr287-204ENSMUST00000170618 1776 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccdc59Q8R2N0 Ywhag-201ENSMUST00000055808 3520 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Syne1-201ENSMUST00000041639 6990 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Numb-210ENSMUST00000154043 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Olfr764-ps1-201ENSMUST00000204763 2854 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Gm9387-201ENSMUST00000098624 1320 ntBASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Tmem30c-203ENSMUST00000120112 3478 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Sptan1-205ENSMUST00000113719 8018 ntTSL 5 BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Gm9089-201ENSMUST00000122027 526 ntBASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Gm23771-201ENSMUST00000178702 110 ntBASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Gm44980-201ENSMUST00000205826 314 ntBASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Gm6781-201ENSMUST00000038304 1242 ntBASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Gm6430-201ENSMUST00000054664 1248 ntBASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Trim69-201ENSMUST00000036089 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Fut10-201ENSMUST00000066173 3183 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Stra6-201ENSMUST00000034880 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Ablim1-212ENSMUST00000111558 3123 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Casz1-201ENSMUST00000094464 4349 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Exoc7-203ENSMUST00000106413 3298 ntAPPRIS ALT1 TSL 5 BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Tmem150c-201ENSMUST00000063192 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ccdc59Q8R2N0 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Ccdc59Q8R2N0 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Ccdc59Q8R2N0 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC10.12□□□□□ -0.79
Ccdc59Q8R2N0 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc59Q8R2N0 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc59Q8R2N0 Btrc-206ENSMUST00000224102 3037 ntBASIC10.12□□□□□ -0.79
Ccdc59Q8R2N0 Dclk1-203ENSMUST00000167204 6025 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc59Q8R2N0 Rest-201ENSMUST00000080359 7004 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccdc59Q8R2N0 Vmn1r213-204ENSMUST00000228758 5975 ntAPPRIS P2 BASIC10.12□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms