Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 CT009713.8-201ENSMUST00000225448 560 ntBASIC10.55□□□□□ -0.72
Ccdc28bQ8CEG5 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Ccdc28bQ8CEG5 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Ccdc28bQ8CEG5 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Ccdc28bQ8CEG5 Tbx22-202ENSMUST00000118986 3035 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Ccdc28bQ8CEG5 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc28bQ8CEG5 Pde9a-206ENSMUST00000134525 1818 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Ccdc28bQ8CEG5 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc28bQ8CEG5 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Ccdc28bQ8CEG5 Txlng-204ENSMUST00000112316 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc28bQ8CEG5 Cngb1-204ENSMUST00000121162 3336 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Ccdc28bQ8CEG5 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Ccdc28bQ8CEG5 CT025645.2-201ENSMUST00000223278 3827 ntBASIC10.55□□□□□ -0.72
Ccdc28bQ8CEG5 Iqgap3-204ENSMUST00000194440 3263 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc28bQ8CEG5 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC10.55□□□□□ -0.72
Ccdc28bQ8CEG5 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc28bQ8CEG5 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc28bQ8CEG5 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc28bQ8CEG5 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 Nrep-201ENSMUST00000051087 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 Gm21358-201ENSMUST00000191645 1659 ntBASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 Cyp2e1-201ENSMUST00000026552 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 Gm11100-201ENSMUST00000112652 1951 ntTSL 5 BASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 Ptrh2-202ENSMUST00000108022 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 Upb1-201ENSMUST00000039925 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 Lnpk-203ENSMUST00000111993 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 Gm15615-201ENSMUST00000118876 198 ntBASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 Gm14395-201ENSMUST00000120494 563 ntBASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 Gm37981-201ENSMUST00000194280 535 ntBASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 Supt7l-205ENSMUST00000202421 3056 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 CT573034.1-201ENSMUST00000222983 313 ntBASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 Atg13-202ENSMUST00000076803 3551 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 Irf9-203ENSMUST00000134863 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 Dyrk1a-203ENSMUST00000122284 2356 ntTSL 5 BASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 Adora3-201ENSMUST00000000574 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 Gm43615-201ENSMUST00000197465 1773 ntBASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 Taf8-201ENSMUST00000067103 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc28bQ8CEG5 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Gm42962-201ENSMUST00000201966 2325 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Tns1-201ENSMUST00000169786 9966 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 AC153498.1-201ENSMUST00000219775 2722 ntBASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 4833420G17Rik-201ENSMUST00000026519 2565 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Ccdc136-209ENSMUST00000181464 3444 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Rad51d-201ENSMUST00000018985 3426 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Gm21142-201ENSMUST00000179999 2604 ntBASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Gm13035-201ENSMUST00000117496 342 ntBASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Gm12986-201ENSMUST00000119037 967 ntBASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Gm12266-201ENSMUST00000120311 962 ntBASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Gm17040-202ENSMUST00000170597 889 ntBASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Gm4753-201ENSMUST00000188327 1255 ntBASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Slc28a2-202ENSMUST00000110524 2836 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Tomm40l-203ENSMUST00000111327 2812 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Dnajc10-201ENSMUST00000028392 4042 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Akap6-202ENSMUST00000219786 4564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Tulp2-209ENSMUST00000210813 2153 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC10.53□□□□□ -0.72
Ccdc28bQ8CEG5 Dcun1d4-201ENSMUST00000063882 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms