Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC11□□□□□ -0.65
Trub1Q8C0D0 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC11□□□□□ -0.65
Trub1Q8C0D0 Gm17221-201ENSMUST00000163909 481 ntBASIC11□□□□□ -0.65
Trub1Q8C0D0 Gm17073-201ENSMUST00000168069 556 ntBASIC11□□□□□ -0.65
Trub1Q8C0D0 Gm9574-201ENSMUST00000173127 845 ntBASIC11□□□□□ -0.65
Trub1Q8C0D0 AC238811.4-201ENSMUST00000178019 1246 ntBASIC11□□□□□ -0.65
Trub1Q8C0D0 AC238940.3-201ENSMUST00000178830 1246 ntBASIC11□□□□□ -0.65
Trub1Q8C0D0 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trub1Q8C0D0 Gm44216-201ENSMUST00000203942 157 ntBASIC11□□□□□ -0.65
Trub1Q8C0D0 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC11□□□□□ -0.65
Trub1Q8C0D0 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11□□□□□ -0.65
Trub1Q8C0D0 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC11□□□□□ -0.65
Trub1Q8C0D0 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trub1Q8C0D0 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC11□□□□□ -0.65
Trub1Q8C0D0 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trub1Q8C0D0 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC11□□□□□ -0.65
Trub1Q8C0D0 Gm7536-201ENSMUST00000077389 444 ntBASIC11□□□□□ -0.65
Trub1Q8C0D0 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trub1Q8C0D0 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC11□□□□□ -0.65
Trub1Q8C0D0 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trub1Q8C0D0 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trub1Q8C0D0 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trub1Q8C0D0 Gm42602-201ENSMUST00000200288 3224 ntBASIC11□□□□□ -0.65
Trub1Q8C0D0 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC11□□□□□ -0.65
Trub1Q8C0D0 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trub1Q8C0D0 Gm44103-201ENSMUST00000204364 3662 ntBASIC11□□□□□ -0.65
Trub1Q8C0D0 AC144938.1-201ENSMUST00000223994 2167 ntBASIC11□□□□□ -0.65
Trub1Q8C0D0 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trub1Q8C0D0 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trub1Q8C0D0 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trub1Q8C0D0 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trub1Q8C0D0 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trub1Q8C0D0 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Gm19680-201ENSMUST00000095050 1513 ntBASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Gm44740-201ENSMUST00000205603 1614 ntBASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Gm11980-201ENSMUST00000121445 986 ntBASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Gm12208-201ENSMUST00000122004 163 ntBASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Gm22442-201ENSMUST00000157256 144 ntBASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Gm25830-201ENSMUST00000158923 132 ntBASIC10.99□□□□□ -0.65
Trub1Q8C0D0 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Gm26119-201ENSMUST00000175601 104 ntBASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Gm5801-201ENSMUST00000182247 780 ntBASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Gm26982-201ENSMUST00000182250 1151 ntBASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Gm9358-201ENSMUST00000183067 927 ntBASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Gm27953-201ENSMUST00000185171 143 ntBASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Gm19918-201ENSMUST00000194858 400 ntBASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Gm31274-201ENSMUST00000197356 229 ntBASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Gm44304-201ENSMUST00000200509 145 ntBASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Gm44605-201ENSMUST00000206892 949 ntBASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Gm9487-201ENSMUST00000216600 472 ntBASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Mir194-2-201ENSMUST00000083648 86 ntBASIC10.99□□□□□ -0.65
Trub1Q8C0D0 n-R5s211-201ENSMUST00000093689 119 ntBASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trub1Q8C0D0 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Trub1Q8C0D0 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms