Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 Gm5311-201ENSMUST00000203518 709 ntBASIC11.27□□□□□ -0.61
Nod1Q8BHB0 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nod1Q8BHB0 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nod1Q8BHB0 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC11.27□□□□□ -0.61
Nod1Q8BHB0 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC11.27□□□□□ -0.61
Nod1Q8BHB0 AC133496.1-201ENSMUST00000223891 743 ntBASIC11.27□□□□□ -0.61
Nod1Q8BHB0 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nod1Q8BHB0 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nod1Q8BHB0 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nod1Q8BHB0 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nod1Q8BHB0 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nod1Q8BHB0 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Nod1Q8BHB0 Gm22341-201ENSMUST00000083775 129 ntBASIC11.27□□□□□ -0.61
Nod1Q8BHB0 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nod1Q8BHB0 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nod1Q8BHB0 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nod1Q8BHB0 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC11.27□□□□□ -0.61
Nod1Q8BHB0 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.27□□□□□ -0.61
Nod1Q8BHB0 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nod1Q8BHB0 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nod1Q8BHB0 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nod1Q8BHB0 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nod1Q8BHB0 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.27□□□□□ -0.61
Nod1Q8BHB0 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nod1Q8BHB0 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.27□□□□□ -0.61
Nod1Q8BHB0 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nod1Q8BHB0 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nod1Q8BHB0 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Nod1Q8BHB0 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nod1Q8BHB0 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nod1Q8BHB0 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nod1Q8BHB0 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.26□□□□□ -0.61
Nod1Q8BHB0 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Gm15746-201ENSMUST00000120684 1027 ntBASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Gm12009-201ENSMUST00000121361 1100 ntBASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Gm22876-201ENSMUST00000175450 298 ntBASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Gm37860-201ENSMUST00000195380 1034 ntBASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Gm43726-201ENSMUST00000199110 775 ntBASIC11.26□□□□□ -0.61
Nod1Q8BHB0 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 AC140314.1-201ENSMUST00000219549 554 ntBASIC11.26□□□□□ -0.61
Nod1Q8BHB0 CT009713.2-201ENSMUST00000225532 1149 ntBASIC11.26□□□□□ -0.61
Nod1Q8BHB0 AC133517.1-201ENSMUST00000225825 594 ntBASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nod1Q8BHB0 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nod1Q8BHB0 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nod1Q8BHB0 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
Nod1Q8BHB0 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nod1Q8BHB0 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC11.25□□□□□ -0.61
Nod1Q8BHB0 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nod1Q8BHB0 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Nod1Q8BHB0 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nod1Q8BHB0 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Nod1Q8BHB0 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Nod1Q8BHB0 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC11.25□□□□□ -0.61
Nod1Q8BHB0 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nod1Q8BHB0 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Nod1Q8BHB0 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Nod1Q8BHB0 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nod1Q8BHB0 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nod1Q8BHB0 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 98.4 ms