Protein–RNA interactions for Protein: Q6KCD5

Nipbl, Nipped-B-like protein, mousemouse

Known RBP Predictions only

Length 2,798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NipblQ6KCD5 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NipblQ6KCD5 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC8.17□□□□□ -1.1
NipblQ6KCD5 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NipblQ6KCD5 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
NipblQ6KCD5 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
NipblQ6KCD5 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NipblQ6KCD5 Gm22994-201ENSMUST00000175422 82 ntBASIC8.17□□□□□ -1.1
NipblQ6KCD5 Mir6972-201ENSMUST00000184774 64 ntBASIC8.17□□□□□ -1.1
NipblQ6KCD5 Gm42875-201ENSMUST00000197674 1015 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
NipblQ6KCD5 Prss23os-203ENSMUST00000208814 975 ntTSL 5 BASIC8.17□□□□□ -1.1
NipblQ6KCD5 Prss23os-204ENSMUST00000209064 972 ntTSL 5 BASIC8.17□□□□□ -1.1
NipblQ6KCD5 Ccr8-201ENSMUST00000048777 1175 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NipblQ6KCD5 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
NipblQ6KCD5 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC8.17□□□□□ -1.1
NipblQ6KCD5 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
NipblQ6KCD5 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NipblQ6KCD5 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NipblQ6KCD5 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
NipblQ6KCD5 Mterf1b-201ENSMUST00000177258 1368 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NipblQ6KCD5 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
NipblQ6KCD5 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
NipblQ6KCD5 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
NipblQ6KCD5 Gm37036-201ENSMUST00000192836 2506 ntBASIC8.17□□□□□ -1.1
NipblQ6KCD5 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC8.17□□□□□ -1.1
NipblQ6KCD5 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NipblQ6KCD5 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
NipblQ6KCD5 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
NipblQ6KCD5 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NipblQ6KCD5 Adgrv1-214ENSMUST00000224088 1492 ntBASIC8.17□□□□□ -1.1
NipblQ6KCD5 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
NipblQ6KCD5 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
NipblQ6KCD5 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
NipblQ6KCD5 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
NipblQ6KCD5 Stmn3-201ENSMUST00000103045 1136 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Gm24161-201ENSMUST00000104592 130 ntBASIC8.16□□□□□ -1.1
NipblQ6KCD5 Zfp637-204ENSMUST00000112861 1202 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Gm10086-201ENSMUST00000136334 354 ntBASIC8.16□□□□□ -1.1
NipblQ6KCD5 Gm11962-201ENSMUST00000145746 255 ntBASIC8.16□□□□□ -1.1
NipblQ6KCD5 D430040D24Rik-201ENSMUST00000149224 910 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Gm1758-201ENSMUST00000164528 606 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Gm20686-201ENSMUST00000175846 535 ntTSL 2 BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Cnih4-205ENSMUST00000193907 531 ntTSL 2 BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Gm37944-201ENSMUST00000194233 414 ntBASIC8.16□□□□□ -1.1
NipblQ6KCD5 Gm5150-202ENSMUST00000194367 1212 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
NipblQ6KCD5 CR974487.1-201ENSMUST00000220984 413 ntBASIC8.16□□□□□ -1.1
NipblQ6KCD5 AC127583.1-201ENSMUST00000224351 540 ntBASIC8.16□□□□□ -1.1
NipblQ6KCD5 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Gm44167-201ENSMUST00000204957 1878 ntBASIC8.16□□□□□ -1.1
NipblQ6KCD5 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Cir1-201ENSMUST00000058615 2821 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Gm13169-201ENSMUST00000122090 1459 ntBASIC8.16□□□□□ -1.1
NipblQ6KCD5 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NipblQ6KCD5 A1cf-204ENSMUST00000224564 1432 ntBASIC8.16□□□□□ -1.1
NipblQ6KCD5 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Cfap77-202ENSMUST00000157048 1042 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Gm19815-201ENSMUST00000175818 335 ntBASIC8.16□□□□□ -1.1
NipblQ6KCD5 Gm42997-201ENSMUST00000196074 918 ntTSL 3 BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Gm43539-201ENSMUST00000196190 363 ntTSL 3 BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Gm33080-201ENSMUST00000205429 172 ntBASIC8.16□□□□□ -1.1
NipblQ6KCD5 Gm2696-201ENSMUST00000220062 723 ntAPPRIS P5 BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Gm43622-201ENSMUST00000200140 2019 ntBASIC8.16□□□□□ -1.1
NipblQ6KCD5 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Gm36211-201ENSMUST00000198171 1497 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Abcc9-205ENSMUST00000204870 1458 ntTSL 2 BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Gm6682-201ENSMUST00000169666 1346 ntBASIC8.16□□□□□ -1.1
NipblQ6KCD5 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NipblQ6KCD5 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NipblQ6KCD5 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Gm45003-201ENSMUST00000205875 2158 ntBASIC8.16□□□□□ -1.1
NipblQ6KCD5 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Gm13842-202ENSMUST00000156331 865 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NipblQ6KCD5 Gm37559-201ENSMUST00000193556 832 ntBASIC8.16□□□□□ -1.1
NipblQ6KCD5 Gm45437-202ENSMUST00000211418 694 ntTSL 3 BASIC8.16□□□□□ -1.1
NipblQ6KCD5 BX649293.1-201ENSMUST00000227437 631 ntBASIC8.16□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms