Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Gm22582-201ENSMUST00000102283 94 ntBASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Gm23061-201ENSMUST00000102348 116 ntBASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Gm11957-201ENSMUST00000118304 779 ntBASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Gm12712-201ENSMUST00000120676 801 ntBASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Gm25288-201ENSMUST00000122800 265 ntBASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Gm13857-201ENSMUST00000139645 173 ntBASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Mir8111-201ENSMUST00000184463 137 ntBASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Gm18801-201ENSMUST00000186616 536 ntBASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Gm5881-201ENSMUST00000204737 367 ntBASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps54Q5SPW0 AC164556.1-201ENSMUST00000221318 751 ntBASIC12.81□□□□□ -0.36
Vps54Q5SPW0 AC137871.1-201ENSMUST00000228278 475 ntBASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps54Q5SPW0 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Vps54Q5SPW0 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.8□□□□□ -0.36
Vps54Q5SPW0 AC129336.2-201ENSMUST00000218053 3086 ntBASIC12.8□□□□□ -0.36
Vps54Q5SPW0 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps54Q5SPW0 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps54Q5SPW0 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps54Q5SPW0 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps54Q5SPW0 Gm9466-201ENSMUST00000218144 2246 ntBASIC12.8□□□□□ -0.36
Vps54Q5SPW0 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps54Q5SPW0 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps54Q5SPW0 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps54Q5SPW0 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Vps54Q5SPW0 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC12.8□□□□□ -0.36
Vps54Q5SPW0 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Vps54Q5SPW0 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vps54Q5SPW0 Gm5526-201ENSMUST00000153604 423 ntBASIC12.8□□□□□ -0.36
Vps54Q5SPW0 Gm25226-201ENSMUST00000158198 123 ntBASIC12.8□□□□□ -0.36
Vps54Q5SPW0 Gm9507-202ENSMUST00000180157 654 ntBASIC12.8□□□□□ -0.36
Vps54Q5SPW0 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Vps54Q5SPW0 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Vps54Q5SPW0 Gm6794-201ENSMUST00000203829 457 ntBASIC12.8□□□□□ -0.36
Vps54Q5SPW0 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC12.8□□□□□ -0.36
Vps54Q5SPW0 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Vps54Q5SPW0 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC12.8□□□□□ -0.36
Vps54Q5SPW0 AC154585.1-201ENSMUST00000218917 997 ntBASIC12.8□□□□□ -0.36
Vps54Q5SPW0 AC134860.2-201ENSMUST00000225277 1036 ntBASIC12.8□□□□□ -0.36
Vps54Q5SPW0 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Vps54Q5SPW0 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps54Q5SPW0 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Vps54Q5SPW0 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Vps54Q5SPW0 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vps54Q5SPW0 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC12.8□□□□□ -0.36
Vps54Q5SPW0 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Vps54Q5SPW0 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps54Q5SPW0 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps54Q5SPW0 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Vps54Q5SPW0 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC12.8□□□□□ -0.36
Vps54Q5SPW0 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Vps54Q5SPW0 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps54Q5SPW0 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps54Q5SPW0 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps54Q5SPW0 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Gm32914-201ENSMUST00000203815 2228 ntBASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Vps54Q5SPW0 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Gm8482-201ENSMUST00000117972 471 ntBASIC12.79□□□□□ -0.36
Vps54Q5SPW0 Gm13841-201ENSMUST00000118829 483 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms