Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 AC144938.1-201ENSMUST00000223994 2167 ntBASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Gm13019-201ENSMUST00000120000 276 ntBASIC11.36□□□□□ -0.59
Syne3Q4FZC9 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Gm7255-201ENSMUST00000187371 908 ntBASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Gm28833-201ENSMUST00000189671 559 ntBASIC11.36□□□□□ -0.59
Syne3Q4FZC9 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC11.36□□□□□ -0.59
Syne3Q4FZC9 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 AC154435.1-201ENSMUST00000223938 959 ntBASIC11.36□□□□□ -0.59
Syne3Q4FZC9 AC132901.1-201ENSMUST00000224345 508 ntBASIC11.36□□□□□ -0.59
Syne3Q4FZC9 AC134793.1-202ENSMUST00000227444 803 ntBASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 AC090962.2-201ENSMUST00000225064 1801 ntBASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Gm19027-201ENSMUST00000187291 1355 ntBASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Syne3Q4FZC9 Gm7405-201ENSMUST00000121476 1337 ntBASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Gm44103-201ENSMUST00000204364 3662 ntBASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Snord23-201ENSMUST00000116828 109 ntBASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Gm12136-201ENSMUST00000120460 1209 ntBASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Gm12791-201ENSMUST00000120788 655 ntBASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Mir1905-201ENSMUST00000122779 82 ntBASIC11.35□□□□□ -0.59
Syne3Q4FZC9 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Gm19927-201ENSMUST00000185792 781 ntBASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Gm8255-201ENSMUST00000218693 305 ntBASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 AC115304.2-201ENSMUST00000226399 332 ntBASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC11.35□□□□□ -0.59
Syne3Q4FZC9 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms