Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm3898-201ENSMUST00000180221 613 ntTSL 5 BASIC13.42□□□□□ -0.26
Smarcc1P97496 Gm28179-201ENSMUST00000188365 613 ntBASIC13.42□□□□□ -0.26
Smarcc1P97496 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Smarcc1P97496 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcc1P97496 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC13.42□□□□□ -0.26
Smarcc1P97496 Gm42617-201ENSMUST00000197640 1229 ntBASIC13.42□□□□□ -0.26
Smarcc1P97496 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcc1P97496 Prss23os-203ENSMUST00000208814 975 ntTSL 5 BASIC13.42□□□□□ -0.26
Smarcc1P97496 Prss23os-204ENSMUST00000209064 972 ntTSL 5 BASIC13.42□□□□□ -0.26
Smarcc1P97496 Gm19090-201ENSMUST00000218187 774 ntBASIC13.42□□□□□ -0.26
Smarcc1P97496 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Smarcc1P97496 AC159006.3-201ENSMUST00000226918 664 ntBASIC13.42□□□□□ -0.26
Smarcc1P97496 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcc1P97496 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Smarcc1P97496 Gm8420-201ENSMUST00000097103 598 ntBASIC13.42□□□□□ -0.26
Smarcc1P97496 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcc1P97496 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Smarcc1P97496 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcc1P97496 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Smarcc1P97496 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcc1P97496 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcc1P97496 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcc1P97496 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Smarcc1P97496 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcc1P97496 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcc1P97496 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcc1P97496 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcc1P97496 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Smarcc1P97496 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Smarcc1P97496 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcc1P97496 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC13.41□□□□□ -0.26
Smarcc1P97496 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcc1P97496 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcc1P97496 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcc1P97496 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Smarcc1P97496 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcc1P97496 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcc1P97496 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcc1P97496 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC13.41□□□□□ -0.26
Smarcc1P97496 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.41□□□□□ -0.26
Smarcc1P97496 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcc1P97496 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Smarcc1P97496 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcc1P97496 Spaca9-201ENSMUST00000102877 671 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcc1P97496 Gm24066-201ENSMUST00000104515 131 ntBASIC13.41□□□□□ -0.26
Smarcc1P97496 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC13.41□□□□□ -0.26
Smarcc1P97496 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC13.41□□□□□ -0.26
Smarcc1P97496 4930529I22Rik-201ENSMUST00000131509 589 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcc1P97496 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC13.41□□□□□ -0.26
Smarcc1P97496 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC13.41□□□□□ -0.26
Smarcc1P97496 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcc1P97496 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC13.41□□□□□ -0.26
Smarcc1P97496 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC13.41□□□□□ -0.26
Smarcc1P97496 Gm45308-201ENSMUST00000210610 415 ntBASIC13.41□□□□□ -0.26
Smarcc1P97496 Gm18122-201ENSMUST00000211390 904 ntBASIC13.41□□□□□ -0.26
Smarcc1P97496 AC153153.1-201ENSMUST00000225803 793 ntBASIC13.41□□□□□ -0.26
Smarcc1P97496 AC174647.1-201ENSMUST00000227419 1271 ntBASIC13.41□□□□□ -0.26
Smarcc1P97496 Gm16477-201ENSMUST00000085365 801 ntBASIC13.41□□□□□ -0.26
Smarcc1P97496 Gm17415-201ENSMUST00000096427 789 ntBASIC13.41□□□□□ -0.26
Smarcc1P97496 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcc1P97496 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcc1P97496 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcc1P97496 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcc1P97496 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Smarcc1P97496 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcc1P97496 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Smarcc1P97496 Gm36211-201ENSMUST00000198171 1497 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcc1P97496 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcc1P97496 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcc1P97496 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcc1P97496 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcc1P97496 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcc1P97496 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Smarcc1P97496 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.41□□□□□ -0.26
Smarcc1P97496 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Smarcc1P97496 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcc1P97496 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcc1P97496 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcc1P97496 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcc1P97496 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcc1P97496 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcc1P97496 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcc1P97496 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcc1P97496 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Smarcc1P97496 Lyrm1-204ENSMUST00000106518 875 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Smarcc1P97496 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcc1P97496 Mrps33-202ENSMUST00000114797 500 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcc1P97496 Gm15476-201ENSMUST00000118247 1191 ntBASIC13.4□□□□□ -0.26
Smarcc1P97496 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcc1P97496 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcc1P97496 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcc1P97496 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcc1P97496 Gm17107-201ENSMUST00000170983 553 ntBASIC13.4□□□□□ -0.26
Smarcc1P97496 Gm29487-201ENSMUST00000190146 256 ntBASIC13.4□□□□□ -0.26
Smarcc1P97496 9230114K14Rik-202ENSMUST00000198720 837 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcc1P97496 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC13.4□□□□□ -0.26
Smarcc1P97496 2010008C14Rik-201ENSMUST00000203956 593 ntBASIC13.4□□□□□ -0.26
Smarcc1P97496 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC13.4□□□□□ -0.26
Smarcc1P97496 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Smarcc1P97496 Gm25125-201ENSMUST00000083340 136 ntBASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms