Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgb1P63158 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC11.83□□□□□ -0.52
Hmgb1P63158 Gm9369-201ENSMUST00000196009 733 ntBASIC11.83□□□□□ -0.52
Hmgb1P63158 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgb1P63158 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC11.83□□□□□ -0.52
Hmgb1P63158 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC11.83□□□□□ -0.52
Hmgb1P63158 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgb1P63158 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.83□□□□□ -0.52
Hmgb1P63158 AC134793.1-202ENSMUST00000227444 803 ntBASIC11.83□□□□□ -0.52
Hmgb1P63158 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Hmgb1P63158 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Hmgb1P63158 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgb1P63158 Gm38192-201ENSMUST00000194364 1847 ntBASIC11.83□□□□□ -0.52
Hmgb1P63158 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Hmgb1P63158 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgb1P63158 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgb1P63158 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgb1P63158 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgb1P63158 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hmgb1P63158 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgb1P63158 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgb1P63158 AC144938.1-201ENSMUST00000223994 2167 ntBASIC11.82□□□□□ -0.52
Hmgb1P63158 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgb1P63158 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC11.82□□□□□ -0.52
Hmgb1P63158 Nipal3-202ENSMUST00000105856 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgb1P63158 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgb1P63158 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Hmgb1P63158 Gm37160-201ENSMUST00000193081 1689 ntBASIC11.82□□□□□ -0.52
Hmgb1P63158 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgb1P63158 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgb1P63158 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Hmgb1P63158 Gm45597-201ENSMUST00000211524 1994 ntBASIC11.82□□□□□ -0.52
Hmgb1P63158 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Hmgb1P63158 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgb1P63158 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC11.82□□□□□ -0.52
Hmgb1P63158 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgb1P63158 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Hmgb1P63158 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC11.82□□□□□ -0.52
Hmgb1P63158 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.82□□□□□ -0.52
Hmgb1P63158 Gm6407-201ENSMUST00000176468 549 ntBASIC11.82□□□□□ -0.52
Hmgb1P63158 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC11.82□□□□□ -0.52
Hmgb1P63158 Gm19013-201ENSMUST00000183895 1222 ntBASIC11.82□□□□□ -0.52
Hmgb1P63158 Gm19014-201ENSMUST00000184828 1189 ntBASIC11.82□□□□□ -0.52
Hmgb1P63158 Gm43671-201ENSMUST00000200422 433 ntBASIC11.82□□□□□ -0.52
Hmgb1P63158 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC11.82□□□□□ -0.52
Hmgb1P63158 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC11.82□□□□□ -0.52
Hmgb1P63158 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.82□□□□□ -0.52
Hmgb1P63158 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.82□□□□□ -0.52
Hmgb1P63158 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.82□□□□□ -0.52
Hmgb1P63158 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC11.82□□□□□ -0.52
Hmgb1P63158 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.82□□□□□ -0.52
Hmgb1P63158 Lgi3-203ENSMUST00000226548 1001 ntBASIC11.82□□□□□ -0.52
Hmgb1P63158 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.82□□□□□ -0.52
Hmgb1P63158 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgb1P63158 Gm42858-201ENSMUST00000202512 1704 ntBASIC11.82□□□□□ -0.52
Hmgb1P63158 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgb1P63158 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgb1P63158 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgb1P63158 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC11.82□□□□□ -0.52
Hmgb1P63158 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgb1P63158 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC11.82□□□□□ -0.52
Hmgb1P63158 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Hmgb1P63158 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgb1P63158 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgb1P63158 C2-205ENSMUST00000148431 1946 ntTSL 5 BASIC11.82□□□□□ -0.52
Hmgb1P63158 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgb1P63158 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgb1P63158 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgb1P63158 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hmgb1P63158 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgb1P63158 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgb1P63158 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Hmgb1P63158 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgb1P63158 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgb1P63158 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.81□□□□□ -0.52
Hmgb1P63158 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgb1P63158 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgb1P63158 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC11.81□□□□□ -0.52
Hmgb1P63158 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.81□□□□□ -0.52
Hmgb1P63158 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgb1P63158 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.81□□□□□ -0.52
Hmgb1P63158 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Hmgb1P63158 Gm5944-201ENSMUST00000118182 1001 ntBASIC11.81□□□□□ -0.52
Hmgb1P63158 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgb1P63158 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgb1P63158 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Hmgb1P63158 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.81□□□□□ -0.52
Hmgb1P63158 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC11.81□□□□□ -0.52
Hmgb1P63158 Gm33080-201ENSMUST00000205429 172 ntBASIC11.81□□□□□ -0.52
Hmgb1P63158 Gm18561-201ENSMUST00000206027 804 ntBASIC11.81□□□□□ -0.52
Hmgb1P63158 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgb1P63158 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.81□□□□□ -0.52
Hmgb1P63158 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgb1P63158 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgb1P63158 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Hmgb1P63158 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgb1P63158 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Hmgb1P63158 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgb1P63158 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hmgb1P63158 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms